RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 HS3ST4Q9Y661 456 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 TOGARAM1Q9Y4F4 1720 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 OR2AG2A6NM03 316 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 OR1F1O43749 312 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 KERAO60938 352 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 SOX30O94993 753 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 MATN4O95460 622 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 RPL38P63173 70 aaKnown RBP9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 RIPOR1Q6ZS17 1223 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 RALGPS2Q86X27 583 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 ITFG1Q8TB96 612 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 SMPDL3AQ92484 453 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 TMEM125Q96AQ2 219 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 TPD52L3Q96J77 140 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 OR2M4Q96R27 311 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 BRINP2Q9C0B6 783 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 PRAMEF11O60813 436 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 GJA5P36382 358 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 KRR1Q13601 381 aaKnown RBP9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 EIF3MQ7L2H7 374 aaKnown RBP9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 TRAM1L1Q8N609 369 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZMIZ2Q8NF64 920 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 C19orf60Q96EN9 201 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 OXNAD1Q96HP4 312 aaPredicted RBP9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 PSKH2Q96QS6 385 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 PRRX2Q99811 253 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 SAR1AQ9NR31 198 aa9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 NOCTQ9UK39 431 aaKnown RBP9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.64□□□□□ -0.87
TNFRSF9-204ENST00000615230 C9IYK1 514 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 SLC16A5O15375 505 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TEX28O15482 410 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TGM5O43548 720 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 RNGTTO60942 597 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 CALCAP01258 141 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 NUDT17P0C025 328 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 ME2P23368 584 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 UGT2B15P54855 530 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 CDC42P60953 191 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 MTM1Q13496 603 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 INO80DQ53TQ3 878 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 C9orf64Q5T6V5 341 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 APLFQ8IW19 511 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 OR10H5Q8NGA6 315 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 CENPTQ96BT3 561 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 RIOK2Q9BVS4 552 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 FNDC11Q9BVV2 318 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TFB2MQ9H5Q4 396 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZSCAN32Q9NX65 697 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 H0Y3Z8 333 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 H0YGN5 161 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TMCC2O75069 709 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 KRT34O76011 436 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 KAT7O95251 611 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 HLA-DQA2P01906 255 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 CPN2P22792 545 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TNFRSF4P43489 277 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 NME5P56597 212 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 DEFA1P59665 94 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 DEFA3P59666 94 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 MRPS21P82921 87 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 PAFAH1B3Q15102 231 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 NR0B2Q15466 257 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 LY6G5CQ5SRR4 150 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TMEM63BQ5T3F8 832 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZNF567Q8N184 647 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 SCML4Q8N228 414 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 SCAMP5Q8TAC9 235 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 SLC35F5Q8WV83 523 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 PNPLA2Q96AD5 504 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 DGAT2Q96PD7 388 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 NDNQ99608 321 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 PCDH12Q9NPG4 1184 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 IL1RAPL1Q9NZN1 696 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 MARF1Q9Y4F3 1742 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 CHD4Q14839 1912 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 ARHGEF9O43307 516 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 SLC28A2O43868 658 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 ERAL1O75616 437 aaKnown RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 NOL4O94818 638 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 GTF2H2Q13888 395 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 DPY19L1Q2PZI1 675 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 ANO7Q6IWH7 933 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 GTF2H2CQ6P1K8 395 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 SCIMPQ6UWF3 145 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TMPRSS6Q8IU80 811 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 SLC43A3Q8NBI5 491 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 DEPDC7Q96QD5 511 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 RNF39Q9H2S5 420 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 FTSJ1Q9UET6 329 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 ZNF490Q9ULM2 529 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 COCHO43405 550 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TRBC1P01850 177 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 UROSP10746 265 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 BMP7P18075 431 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 GNAZP19086 355 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 TCN1P20061 433 aaPredicted RBP9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 GSTM5P46439 218 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 MAPK12P53778 367 aa9.63□□□□□ -0.87
TNFRSF9-204ENST00000615230 JAG1P78504 1218 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms