RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 GPRC5CQ9NQ84 441 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 ACTR3BQ9P1U1 418 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 KRBA1A5PL33 1030 aa13.65□□□□□ -0.23
CHD1-212ENST00000614616 MT-ND1P03886 318 aa13.65□□□□□ -0.23
CHD1-212ENST00000614616 MSR1P21757 451 aa13.65□□□□□ -0.23
CHD1-212ENST00000614616 DLG2Q15700 870 aa13.65□□□□□ -0.23
CHD1-212ENST00000614616 EMC10Q5UCC4 262 aa13.65□□□□□ -0.23
CHD1-212ENST00000614616 LYPLAL1Q5VWZ2 237 aa13.65□□□□□ -0.23
CHD1-212ENST00000614616 SNX20Q7Z614 316 aa13.65□□□□□ -0.23
CHD1-212ENST00000614616 CHERPQ8IWX8 916 aaKnown RBP13.65□□□□□ -0.23
CHD1-212ENST00000614616 UBE2E3Q969T4 207 aa13.65□□□□□ -0.23
CHD1-212ENST00000614616 BCL7BQ9BQE9 202 aa13.65□□□□□ -0.23
CHD1-212ENST00000614616 NFKBIZQ9BYH8 718 aa13.65□□□□□ -0.23
CHD1-212ENST00000614616 ZDHHC18Q9NUE0 388 aa13.65□□□□□ -0.23
CHD1-212ENST00000614616 FXYD6-FXYD2A0A087WZ82 144 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 BTBD19C9JJ37 291 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 TMEM44Q2T9K0 475 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 SMARCD1Q96GM5 515 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 FEM1CQ96JP0 617 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 MAF1Q9H063 256 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 FXYD6Q9H0Q3 95 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 PAK1IP1Q9NWT1 392 aaPredicted RBP13.64□□□□□ -0.23
CHD1-212ENST00000614616 MARK1Q9P0L2 795 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 A0A1W2PPW3 197 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 CHRNB1P11230 501 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 CD79BP40259 229 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 PTP4A2Q12974 167 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 CLCA4Q14CN2 919 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 TLR1Q15399 786 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 SLC26A9Q7LBE3 791 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 OXCT2Q9BYC2 517 aaPredicted RBP13.64□□□□□ -0.23
CHD1-212ENST00000614616 POLR2J2Q9GZM3 115 aaKnown RBP13.64□□□□□ -0.23
CHD1-212ENST00000614616 TBC1D17Q9HA65 648 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 ZBTB26Q9HCK0 441 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 LMTK2Q8IWU2 1503 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 FGF10O15520 208 aaPredicted RBP13.64□□□□□ -0.23
CHD1-212ENST00000614616 ECHS1P30084 290 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 MADCAM1Q13477 382 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 SSX2Q16385 188 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 GPAT3Q53EU6 434 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 TDRD10Q5VZ19 366 aaKnown RBP13.64□□□□□ -0.23
CHD1-212ENST00000614616 TLDC1Q6P9B6 456 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 ZNF782Q6ZMW2 699 aaPredicted RBP13.64□□□□□ -0.23
CHD1-212ENST00000614616 DCDC5Q6ZRR9 648 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 GALNT7Q86SF2 657 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 ZSCAN1Q8NBB4 408 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 TRIM43Q96BQ3 446 aaPredicted RBP13.64□□□□□ -0.23
CHD1-212ENST00000614616 ZNF408Q9H9D4 720 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 ST8SIA6P61647 398 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 LPIN3Q9BQK8 851 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 SLC39A8Q9C0K1 460 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 PCDHAC1Q9H158 963 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 ATXN3LQ9H3M9 355 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 IFT46Q9NQC8 304 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 ABCG1P45844 678 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 NKX2-5P52952 324 aaPredicted RBP13.64□□□□□ -0.23
CHD1-212ENST00000614616 ATP13A4Q4VNC1 1196 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 ZNF730Q6ZMV8 503 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 RIOK2Q9BVS4 552 aaKnown RBP13.64□□□□□ -0.23
CHD1-212ENST00000614616 DNAJA1P31689 397 aaKnown RBP13.64□□□□□ -0.23
CHD1-212ENST00000614616 PPP5CP53041 499 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 TAGLNQ01995 201 aaKnown RBP13.64□□□□□ -0.23
CHD1-212ENST00000614616 TAF13Q15543 124 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 EARS2Q5JPH6 523 aaKnown RBP13.64□□□□□ -0.23
CHD1-212ENST00000614616 FAM122CQ6P4D5 195 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 AGAP2Q99490 1192 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 EBF1Q9UH73 591 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 ACSL5Q9ULC5 683 aa13.64□□□□□ -0.23
CHD1-212ENST00000614616 ERCC6L2Q5T890 1561 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 E9PAM4 449 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 NR2F1P10589 423 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 TYMPP19971 482 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 ADGRG6Q86SQ4 1221 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 TICAM1Q8IUC6 712 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 TTYH3Q9C0H2 523 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 FOLH1BQ9HBA9 442 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 RPL36Q9Y3U8 105 aaKnown RBP13.63□□□□□ -0.23
CHD1-212ENST00000614616 PCDHGB6Q9Y5F9 930 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 ZNF705EA8MWA4 302 aaPredicted RBP13.63□□□□□ -0.23
CHD1-212ENST00000614616 TPPPO94811 219 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 INMTO95050 263 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 FECHP22830 423 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 NTSP30990 170 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 SLC30A8Q8IWU4 369 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 SYNE4Q8N205 404 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 ZNF512Q96ME7 567 aaPredicted RBP13.63□□□□□ -0.23
CHD1-212ENST00000614616 CCDC86Q9H6F5 360 aaKnown RBP13.63□□□□□ -0.23
CHD1-212ENST00000614616 SEMA3GQ9NS98 782 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 MALT1Q9UDY8 824 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 POFUT2Q9Y2G5 429 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 RASAL1O95294 804 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 BUD31P41223 144 aaPredicted RBP13.63□□□□□ -0.23
CHD1-212ENST00000614616 TEAD4Q15561 434 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 DCST1Q5T197 706 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 METTL25Q8N6Q8 603 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 POMGNT2Q8NAT1 580 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 FLAD1Q8NFF5 587 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 LRRC58Q96CX6 371 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 C11orf16Q9NQ32 467 aa13.63□□□□□ -0.23
CHD1-212ENST00000614616 SLAIN2Q9P270 581 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms