RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 TMED10P49755 219 aaKnown RBP13.66□□□□□ -0.22
HPS1-215ENST00000613394 CCT8P50990 548 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 STC1P52823 247 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 RHOAP61586 193 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 PURAQ00577 322 aaKnown RBP13.66□□□□□ -0.22
HPS1-215ENST00000613394 BLOC1S3Q6QNY0 202 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 HIPK3Q9H422 1215 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 RAD21L1Q9H4I0 556 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 RPF2Q9H7B2 306 aaKnown RBP13.66□□□□□ -0.22
HPS1-215ENST00000613394 CD300AQ9UGN4 299 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 AGO1Q9UL18 857 aaKnown RBP13.66□□□□□ -0.22
HPS1-215ENST00000613394 PNMA8BQ9ULN7 279 aaPredicted RBP13.66□□□□□ -0.22
HPS1-215ENST00000613394 RBM47A0AV96 593 aaKnown RBP13.66□□□□□ -0.22
HPS1-215ENST00000613394 SH3BP5O60239 455 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 CHRNA1P02708 482 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 UROSP10746 265 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 EIF2B2P49770 351 aaKnown RBP13.66□□□□□ -0.22
HPS1-215ENST00000613394 CCNYL2Q5T2Q4 361 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 AFTPHQ6ULP2 937 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 MICU2Q8IYU8 434 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 KATNBL1Q9H079 304 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 TUBB1Q9H4B7 451 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 LTB4R2Q9NPC1 389 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 TRMT13Q9NUP7 481 aaKnown RBP13.66□□□□□ -0.22
HPS1-215ENST00000613394 SPO11Q9Y5K1 396 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 RAI2Q9Y5P3 530 aa13.66□□□□□ -0.22
HPS1-215ENST00000613394 A0A1W2PQ67 120 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 CPSF4O95639 269 aaKnown RBP13.65□□□□□ -0.22
HPS1-215ENST00000613394 TACR2P21452 398 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 RGS4P49798 205 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 AAK1Q2M2I8 961 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 C6orf136Q5SQH8 315 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 CACHD1Q5VU97 1274 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 CRTC3Q6UUV7 619 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 PHACTR4Q8IZ21 702 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 BORCS5Q969J3 196 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 TFB2MQ9H5Q4 396 aaKnown RBP13.65□□□□□ -0.22
HPS1-215ENST00000613394 NMRK2Q9NPI5 230 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 GKN1Q9NS71 199 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 TLR6Q9Y2C9 796 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 ZFP37Q9Y6Q3 630 aaPredicted RBP13.65□□□□□ -0.22
HPS1-215ENST00000613394 TYW5A2RUC4 315 aaKnown RBP13.65□□□□□ -0.22
HPS1-215ENST00000613394 MUSKO15146 869 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 KERAO60938 352 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 RFC2P35250 354 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 TUBA4AP68366 448 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 PSAPL1Q6NUJ1 521 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 SPATA19Q7Z5L4 167 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 THAP5Q7Z6K1 395 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 ZNF467Q7Z7K2 595 aaPredicted RBP13.65□□□□□ -0.22
HPS1-215ENST00000613394 FNDC8Q8TC99 324 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 PNPT1Q8TCS8 783 aaKnown RBP13.65□□□□□ -0.22
HPS1-215ENST00000613394 FEM1CQ96JP0 617 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 TRIM54Q9BYV2 358 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 RASSF1Q9NS23 344 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 POLR3BQ9NW08 1133 aaPredicted RBP13.65□□□□□ -0.22
HPS1-215ENST00000613394 AASSQ9UDR5 926 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 CNOT11Q9UKZ1 510 aaKnown RBP13.65□□□□□ -0.22
HPS1-215ENST00000613394 DFNA5O60443 496 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 MGEA5O60502 916 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 DIRAS1O95057 198 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 ZNF33AQ06730 810 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 IL10RBQ08334 325 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 PABPC1LQ4VXU2 614 aaKnown RBP13.65□□□□□ -0.22
HPS1-215ENST00000613394 GPR180Q86V85 440 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 EPHX4Q8IUS5 362 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 ATG16L2Q8NAA4 619 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 ZUFSPQ96AP4 578 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 ITCHQ96J02 903 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 MYRFLQ96LU7 910 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 GLT1D1Q96MS3 346 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 OR52E6Q96RD3 313 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 NOL6Q9H6R4 1146 aaKnown RBP13.65□□□□□ -0.22
HPS1-215ENST00000613394 MRM3Q9HC36 420 aaKnown RBP13.65□□□□□ -0.22
HPS1-215ENST00000613394 CIDEBQ9UHD4 219 aa13.65□□□□□ -0.22
HPS1-215ENST00000613394 MGAMO43451 1857 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 ARVCFO00192 962 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 XYLBO75191 536 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 RPL17P18621 184 aaKnown RBP13.64□□□□□ -0.23
HPS1-215ENST00000613394 VARS2Q5ST30 1063 aaKnown RBP13.64□□□□□ -0.23
HPS1-215ENST00000613394 MFSD14CQ5VZR4 134 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 RNF219Q5W0B1 726 aaPredicted RBP13.64□□□□□ -0.23
HPS1-215ENST00000613394 CYP20A1Q6UW02 462 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 R3HCC1LQ7Z5L2 792 aaKnown RBP13.64□□□□□ -0.23
HPS1-215ENST00000613394 PGBD5Q8N414 524 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 KLHDC9Q8NEP7 349 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 KIAA1191Q96A73 305 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 PLEKHA8Q96JA3 519 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 SLC30A3Q99726 388 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 ADGRE3Q9BY15 652 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 UGT2B28Q9BY64 529 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 LRRC3Q9BY71 257 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 ROGDIQ9GZN7 287 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 ASB8Q9H765 288 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 AGPAT4Q9NRZ5 378 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 COQ6Q9Y2Z9 468 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 H3BMQ9 156 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 NBNO60934 754 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 PRKD3O94806 890 aa13.64□□□□□ -0.23
HPS1-215ENST00000613394 ESRRBO95718 433 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms