RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 UGT1A10Q9HAW8 530 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 UGT1A8Q9HAW9 530 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 LHX6Q9UPM6 363 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 DRG1Q9Y295 367 aaKnown RBP12.14□□□□□ -0.47
CBWD3-208ENST00000612050 PCDHB11Q9Y5F2 797 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 ASXL3Q9C0F0 2248 aa12.14□□□□□ -0.47
CBWD3-208ENST00000612050 ZNF106Q9H2Y7 1883 aaKnown RBP12.14□□□□□ -0.47
CBWD3-208ENST00000612050 IGHV1OR21-1A0A087WYE8 117 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 GOLGA6L10A0A0M3HER8 536 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 OR2AG2A6NM03 316 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 TAF4O00268 1085 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 QSOX1O00391 747 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 B4GAT1O43505 415 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 POP7O75817 140 aaKnown RBP12.13□□□□□ -0.47
CBWD3-208ENST00000612050 KRT37O76014 449 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 APRTP07741 180 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 XRCC1P18887 633 aaPredicted RBP12.13□□□□□ -0.47
CBWD3-208ENST00000612050 PBLDP30039 288 aaPredicted RBP12.13□□□□□ -0.47
CBWD3-208ENST00000612050 MC4RP32245 332 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 BASP1P80723 227 aaKnown RBP12.13□□□□□ -0.47
CBWD3-208ENST00000612050 CCDC173Q0VFZ6 552 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 KRT33BQ14525 404 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 OASLQ15646 514 aaKnown RBP12.13□□□□□ -0.47
CBWD3-208ENST00000612050 AGAP9Q5VTM2 703 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 KCTD11Q693B1 232 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 TMEM71Q6P5X7 295 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 DRICH1Q6PGQ1 229 aaPredicted RBP12.13□□□□□ -0.47
CBWD3-208ENST00000612050 WASH2PQ6VEQ5 465 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 NLRP9Q7RTR0 991 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 TAS2R42Q7RTR8 314 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 B3GNT8Q7Z7M8 397 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 SFTPA2Q8IWL1 248 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 AGBL5Q8NDL9 886 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 PPHLN1Q8NEY8 458 aaKnown RBP12.13□□□□□ -0.47
CBWD3-208ENST00000612050 NCSTNQ92542 709 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 GORASP1Q9BQQ3 440 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 UCK1Q9HA47 277 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 WASH6PQ9NQA3 447 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 PRDM8Q9NQV8 689 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 NLE1Q9NVX2 485 aaPredicted RBP12.13□□□□□ -0.47
CBWD3-208ENST00000612050 PISDQ9UG56 409 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 ANAPC5Q9UJX4 755 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 ST14Q9Y5Y6 855 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 CHD8Q9HCK8 2581 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 UNC13CQ8NB66 2214 aa12.13□□□□□ -0.47
CBWD3-208ENST00000612050 LILRA5A6NI73 299 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 SLC35G4P0C7Q5 338 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 TPH1P17752 444 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 RPL10P27635 214 aaKnown RBP12.12□□□□□ -0.47
CBWD3-208ENST00000612050 CD1CP29017 333 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 ZNF140P52738 457 aaPredicted RBP12.12□□□□□ -0.47
CBWD3-208ENST00000612050 LIMK2P53671 638 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 MAPK10P53779 464 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 PRAMEP78395 509 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 CACNG1Q06432 222 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 ZFP36L1Q07352 338 aaKnown RBP12.12□□□□□ -0.47
CBWD3-208ENST00000612050 DMPKQ09013 629 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 SQSTM1Q13501 440 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 OLIG2Q13516 323 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.12□□□□□ -0.47
CBWD3-208ENST00000612050 LYPLAL1Q5VWZ2 237 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 CYB5D1Q6P9G0 228 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 WDR74Q6RFH5 385 aaPredicted RBP12.12□□□□□ -0.47
CBWD3-208ENST00000612050 ABRAXAS1Q6UWZ7 409 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 DET1Q7L5Y6 550 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 KLHDC8BQ8IXV7 354 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 NXPE1Q8N323 547 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 RASGEF1AQ8N9B8 481 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 OR13C4Q8NGS5 318 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 NAF1Q96HR8 494 aaKnown RBP12.12□□□□□ -0.47
CBWD3-208ENST00000612050 CCDC74BQ96LY2 380 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 TSSK1BQ9BXA7 367 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 ETNK1Q9HBU6 452 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 ACSL5Q9ULC5 683 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 PCDHGA7Q9Y5G6 932 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 CEP295Q9C0D2 2601 aa12.12□□□□□ -0.47
CBWD3-208ENST00000612050 MGAT4DA6NG13 374 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 H7C0S8 307 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 KLK10O43240 276 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 LDB2O43679 373 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 TLX3O43711 291 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-208ENST00000612050 GSTM1P09488 218 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 ATP1B2P14415 290 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-208ENST00000612050 ADRA1DP25100 572 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 CD82P27701 267 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 CXCR5P32302 372 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 PDX1P52945 283 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 TMPRSS3P57727 454 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 GSTM4Q03013 218 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 SEMA5AQ13591 1074 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 PTPRCAPQ14761 206 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 PLCL1Q15111 1095 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 COL28A1Q2UY09 1125 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 SNAP47Q5SQN1 464 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 NKAIN2Q5VXU1 208 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 DENND5AQ6IQ26 1287 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 C19orf48Q6RUI8 117 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 TMEM26Q6ZUK4 368 aa12.11□□□□□ -0.47
CBWD3-208ENST00000612050 ZNF761Q86XN6 746 aaPredicted RBP12.11□□□□□ -0.47
CBWD3-208ENST00000612050 FAM129CQ86XR2 697 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms