RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 OR2I1PQ8NGU4 316 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 STAMBPL1Q96FJ0 436 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 NAT9Q9BTE0 207 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 ABCG8Q9H221 673 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 WDR26Q9H7D7 661 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 IL21RQ9HBE5 538 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 ARNT2Q9HBZ2 717 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 DLL3Q9NYJ7 618 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 KLHL14Q9P2G3 628 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 SLC17A7Q9P2U7 560 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 FNDC3AQ9Y2H6 1198 aaKnown RBP8.76□□□□□ -1.01
SMAD4-217ENST00000611848 MAD1L1Q9Y6D9 718 aa8.76□□□□□ -1.01
SMAD4-217ENST00000611848 SPTBN2O15020 2390 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 SCN8AQ9UQD0 1980 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 HMX2A2RU54 273 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 GOLGA8CPA6NN73 597 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 TRIM49D1C9J1S8 452 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 H0YHG0 523 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 H3BM21 787 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 GOLGA8RI6L899 631 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 PCDHGA12O60330 932 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 KRT38O76015 456 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 PGAM1P18669 254 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 CNTFP26441 200 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 CHRNA4P43681 627 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 BLKP51451 505 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 KIAA1024LP59773 190 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 HNRNPKP61978 463 aaKnown RBP eCLIP8.75□□□□□ -1.01
SMAD4-217ENST00000611848 NAB1Q13506 487 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 FZD2Q14332 565 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 PUM1Q14671 1186 aaKnown RBP eCLIP8.75□□□□□ -1.01
SMAD4-217ENST00000611848 NFATC4Q14934 902 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 SEPT7Q16181 437 aaKnown RBP8.75□□□□□ -1.01
SMAD4-217ENST00000611848 PRAMEF14Q5SWL7 426 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 FBXW10Q5XX13 1052 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 RAET1GQ6H3X3 334 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 ZNF449Q6P9G9 518 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 MARK2Q7KZI7 788 aaKnown RBP8.75□□□□□ -1.01
SMAD4-217ENST00000611848 GLT6D1Q7Z4J2 308 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 CTAGE3PQ8IX95 158 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 FITM2Q8N6M3 262 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 CCDC63Q8NA47 563 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 ZNF398Q8TD17 642 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 BRSK1Q8TDC3 778 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 BLOC1S5Q8TDH9 187 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 SCAMP4Q969E2 229 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 EID2BQ96D98 161 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 RMDN2Q96LZ7 410 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 FAM83DQ9H4H8 585 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 SLC40A1Q9NP59 571 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 SLCO1B3Q9NPD5 702 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 PHPT1Q9NRX4 125 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-217ENST00000611848 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.75□□□□□ -1.016e-6■□□□□ 8.3
SMAD4-217ENST00000611848 NFKBIL1Q9UBC1 381 aaPredicted RBP8.75□□□□□ -1.01
SMAD4-217ENST00000611848 CD84Q9UIB8 345 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 OR1A2Q9Y585 309 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 SPO11Q9Y5K1 396 aa8.75□□□□□ -1.01
SMAD4-217ENST00000611848 ARHGEF17Q96PE2 2063 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-217ENST00000611848 C2orf81A6NN90 581 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 K7ESM1 405 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 TNFRSF10CO14798 259 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 TM4SF5O14894 197 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 KLF11O14901 512 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 AURKAO14965 403 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 FLRT2O43155 660 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 UGT1A9O60656 530 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 USP12O75317 370 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 UBOX5O94941 541 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 CRTAMO95727 393 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 CSF2P04141 144 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 MYCLP1P12525 358 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-217ENST00000611848 CD59P13987 128 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 NME1P15531 152 aaKnown RBP8.74□□□□□ -1.01
SMAD4-217ENST00000611848 EPHA8P29322 1005 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-217ENST00000611848 DCDC1P59894 354 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 CDK3Q00526 305 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 PDE1BQ01064 536 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 CDH17Q12864 832 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 EIF2B5Q13144 721 aaKnown RBP8.74□□□□□ -1.01
SMAD4-217ENST00000611848 OLIG2Q13516 323 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 FRG1Q14331 258 aaKnown RBP8.74□□□□□ -1.01
SMAD4-217ENST00000611848 SHBQ15464 509 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 TAF1AQ15573 450 aaPredicted RBP8.74□□□□□ -1.01
SMAD4-217ENST00000611848 INAVAQ3KP66 663 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 TPRG1LQ5T0D9 272 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 HENMT1Q5T8I9 393 aaKnown RBP8.74□□□□□ -1.01
SMAD4-217ENST00000611848 PDPK2PQ6A1A2 396 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 DENND5AQ6IQ26 1287 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 ENPP7Q6UWV6 458 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 ADAMTSL4Q6UY14 1074 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 RFLNAQ6ZTI6 216 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 OTOAQ7RTW8 1153 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 PELI3Q8N2H9 469 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 TTC30BQ8N4P2 665 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 DTX3LQ8TDB6 740 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 SAP25Q8TEE9 199 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 BTN2A2Q8WVV5 523 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 FUBP1Q96AE4 644 aaKnown RBP8.74□□□□□ -1.01
SMAD4-217ENST00000611848 WDR92Q96MX6 357 aa8.74□□□□□ -1.01
SMAD4-217ENST00000611848 PLEKHG4BQ96PX9 1271 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms