RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 SLC39A1Q9NY26 324 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 SLC23A2Q9UGH3 650 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 FEZ2Q9UHY8 353 aaPredicted RBP18.91■□□□□ 0.62
CTSA-217ENST00000607482 CRLS1Q9UJA2 301 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 ADGRG1Q9Y653 693 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 CACNA1GO43497 2377 aa18.91■□□□□ 0.62
CTSA-217ENST00000607482 OR2AG2A6NM03 316 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 EFCAB7A8K855 629 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 POP7O75817 140 aaKnown RBP18.9■□□□□ 0.62
CTSA-217ENST00000607482 GAS8O95995 478 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 THRAP10827 490 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 LIPCP11150 499 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 CCL4P13236 92 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 XRCC1P18887 633 aaPredicted RBP18.9■□□□□ 0.62
CTSA-217ENST00000607482 CD82P27701 267 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 PBLDP30039 288 aaPredicted RBP18.9■□□□□ 0.62
CTSA-217ENST00000607482 CSF2RBP32927 897 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 HADHAP40939 763 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 ETV5P41161 510 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 TMPRSS15P98073 1019 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 PTPRCAPQ14761 206 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 KHDC1Q4VXA5 237 aaKnown RBP18.9■□□□□ 0.62
CTSA-217ENST00000607482 SOWAHCQ53LP3 525 aaPredicted RBP18.9■□□□□ 0.62
CTSA-217ENST00000607482 MANEAQ5SRI9 462 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 FNBP1LQ5T0N5 605 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 GPRC6AQ5T6X5 926 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 TMEM220Q6QAJ8 160 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 DET1Q7L5Y6 550 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 ZSCAN1Q8NBB4 408 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 ZNF514Q96K75 400 aaPredicted RBP18.9■□□□□ 0.62
CTSA-217ENST00000607482 TBC1D10AQ9BXI6 508 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 ASPSCR1Q9BZE9 553 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 TMEM9Q9P0T7 183 aa18.9■□□□□ 0.62
CTSA-217ENST00000607482 COL27A1Q8IZC6 1860 aaPredicted RBP18.89■□□□□ 0.61
CTSA-217ENST00000607482 A0A0U1RQJ8 604 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 A6NCN8 305 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 DDX3YO15523 660 aaKnown RBP18.89■□□□□ 0.61
CTSA-217ENST00000607482 ARHGAP6O43182 974 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 PSMD3O43242 534 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 SRP72O76094 671 aaKnown RBP18.89■□□□□ 0.61
CTSA-217ENST00000607482 OLIG2Q13516 323 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 SEPT6Q14141 434 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 DCAF12Q5T6F0 453 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 ZFAND4Q86XD8 727 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 ZNF547Q8IVP9 402 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 TAB3Q8N5C8 712 aaPredicted RBP18.89■□□□□ 0.61
CTSA-217ENST00000607482 RASGEF1AQ8N9B8 481 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 DDHD1Q8NEL9 900 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 UBE2Q2Q8WVN8 375 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 ART4Q93070 314 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 ULK4Q96C45 1275 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 HES6Q96HZ4 224 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 TMEM121Q9BTD3 319 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 LRRC40Q9H9A6 602 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 FAM8A1Q9UBU6 413 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 FKBPLQ9UIM3 349 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 TMPRSS11EQ9UL52 423 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 SLC30A1Q9Y6M5 507 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 CAPN6Q9Y6Q1 641 aa18.89■□□□□ 0.61
CTSA-217ENST00000607482 CFAP99D6REC4 459 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 E7EVH7 732 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 STMND1H3BQB6 276 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 GPR39O43194 453 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 RASSF9O75901 435 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 UBXN7O94888 489 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 FGF3P11487 239 aaPredicted RBP18.88■□□□□ 0.61
CTSA-217ENST00000607482 TYRP1P17643 537 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 ITGALP20701 1170 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 ADRA1AP35348 466 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 ATP1A2P50993 1020 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 RAB15P59190 212 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 RHDQ02161 417 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 RPS6KA1Q15418 735 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 TGIF1Q15583 401 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 AGAP9Q5VTM2 703 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 TMEM26Q6ZUK4 368 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 RBM12BQ8IXT5 1001 aaKnown RBP18.88■□□□□ 0.61
CTSA-217ENST00000607482 POT1Q9NUX5 634 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 FOXJ2Q9P0K8 574 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 ZNF148Q9UQR1 794 aa18.88■□□□□ 0.61
CTSA-217ENST00000607482 DNMT3AQ9Y6K1 912 aaPredicted RBP18.88■□□□□ 0.61
CTSA-217ENST00000607482 ZFC3H1O60293 1989 aaKnown RBP18.88■□□□□ 0.61
CTSA-217ENST00000607482 LILRA5A6NI73 299 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 OR52A4PA6NMU1 304 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 C9orf172C9J069 976 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 IFNB1P01574 187 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 CCDC175P0C221 793 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 UBE2IP63279 158 aaKnown RBP18.87■□□□□ 0.61
CTSA-217ENST00000607482 CFHR1Q03591 330 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 KRT33BQ14525 404 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 PLCL1Q15111 1095 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 ABRAXAS1Q6UWZ7 409 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 WASH2PQ6VEQ5 465 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 BEND7Q8N7W2 519 aaPredicted RBP18.87■□□□□ 0.61
CTSA-217ENST00000607482 JPH3Q8WXH2 748 aaPredicted RBP18.87■□□□□ 0.61
CTSA-217ENST00000607482 SLC39A7Q92504 469 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 SGF29Q96ES7 293 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 TGM7Q96PF1 710 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 GORASP1Q9BQQ3 440 aa18.87■□□□□ 0.61
CTSA-217ENST00000607482 B3GNT4Q9C0J1 378 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms