RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 TTLL9Q3SXZ7 439 aa21.3■■□□□ 1
USP6NL-204ENST00000606752 LDLRAP1Q5SW96 308 aa21.3■■□□□ 1
USP6NL-204ENST00000606752 LSMEM2Q8N112 164 aa21.3■■□□□ 1
USP6NL-204ENST00000606752 FITM2Q8N6M3 262 aa21.3■■□□□ 1
USP6NL-204ENST00000606752 ZNF781Q8N8C0 355 aa21.3■■□□□ 1
USP6NL-204ENST00000606752 OR2T3Q8NH03 318 aa21.3■■□□□ 1
USP6NL-204ENST00000606752 CXorf40AQ8TE69 158 aa21.3■■□□□ 1
USP6NL-204ENST00000606752 GLYATL1Q969I3 302 aa21.3■■□□□ 1
USP6NL-204ENST00000606752 L3HYPDHQ96EM0 354 aa21.3■■□□□ 1
USP6NL-204ENST00000606752 LRRC37BQ96QE4 947 aa21.3■■□□□ 1
USP6NL-204ENST00000606752 HAO1Q9UJM8 370 aa21.3■■□□□ 1
USP6NL-204ENST00000606752 COQ6Q9Y2Z9 468 aa21.3■■□□□ 1
USP6NL-204ENST00000606752 NPEPPSL1A6NEC2 478 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 MSH3P20585 1137 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 CCDC15Q0P6D6 951 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 PRKAA1Q13131 559 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 HSF5Q4G112 596 aaPredicted RBP21.29■■□□□ 1
USP6NL-204ENST00000606752 ZNF776Q68DI1 518 aaPredicted RBP21.29■■□□□ 1
USP6NL-204ENST00000606752 AADATQ8N5Z0 425 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 GBP7Q8N8V2 638 aaPredicted RBP21.29■■□□□ 1
USP6NL-204ENST00000606752 IL17RCQ8NAC3 791 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 EXT2Q93063 718 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 NUS1Q96E22 293 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 KCTD5Q9NXV2 234 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 SPTBN5Q9NRC6 3674 aaKnown RBP21.29■■□□□ 1
USP6NL-204ENST00000606752 AP1G1O43747 822 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 AP2A2O94973 939 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 CCR10P46092 362 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 STARD3Q14849 445 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 ZNF678Q5SXM1 525 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 RAB44Q7Z6P3 723 aaPredicted RBP21.29■■□□□ 1
USP6NL-204ENST00000606752 NLRP8Q86W28 1048 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 WWP1Q9H0M0 922 aa21.29■■□□□ 1
USP6NL-204ENST00000606752 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.29■■□□□ 1
USP6NL-204ENST00000606752 MTX2O75431 263 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 GFAPP14136 432 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 GLULP15104 373 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 ALOX15P16050 662 aaPredicted RBP21.28■■□□□ 1
USP6NL-204ENST00000606752 RPS14P62263 151 aaKnown RBP21.28■■□□□ 1
USP6NL-204ENST00000606752 HERVK_113P63132 956 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 DPTQ07507 201 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 PFKFB4Q16877 469 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 ACSBG2Q5FVE4 666 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 AGBL4Q5VU57 503 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 KIAA1211LQ6NV74 962 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP21.28■■□□□ 1
USP6NL-204ENST00000606752 DET1Q7L5Y6 550 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 TRMT11Q7Z4G4 463 aaKnown RBP21.28■■□□□ 1
USP6NL-204ENST00000606752 GPSM1Q86YR5 675 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 HDDC3Q8N4P3 179 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 PTGR2Q8N8N7 351 aaPredicted RBP21.28■■□□□ 1
USP6NL-204ENST00000606752 ERVK-6Q9BXR3 956 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 STN1Q9H668 368 aaKnown RBP21.28■■□□□ 1
USP6NL-204ENST00000606752 FBRSQ9HAH7 460 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 HEY2Q9UBP5 337 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 PLXNB3Q9ULL4 1909 aa21.28■■□□□ 1
USP6NL-204ENST00000606752 PLXNA2O75051 1894 aa21.27■■□□□ 1
USP6NL-204ENST00000606752 SUPT3HB4E1H0 165 aa21.27■■□□□ 1
USP6NL-204ENST00000606752 TSPAN6O43657 245 aa21.27■■□□□ 1
USP6NL-204ENST00000606752 SUPT3HO75486 399 aa21.27■■□□□ 1
USP6NL-204ENST00000606752 KLF8O95600 359 aaPredicted RBP21.27■■□□□ 1
USP6NL-204ENST00000606752 ASGR2P07307 311 aa21.27■■□□□ 1
USP6NL-204ENST00000606752 CBSLP0DN79 551 aa21.27■■□□□ 1
USP6NL-204ENST00000606752 CCR7P32248 378 aa21.27■■□□□ 1
USP6NL-204ENST00000606752 CBSP35520 551 aa21.27■■□□□ 1
USP6NL-204ENST00000606752 RPL14P50914 215 aaKnown RBP21.27■■□□□ 1
USP6NL-204ENST00000606752 HK2P52789 917 aa21.27■■□□□ 1
USP6NL-204ENST00000606752 COPAP53621 1224 aa21.27■■□□□ 1
USP6NL-204ENST00000606752 MLLT1Q03111 559 aaPredicted RBP21.27■■□□□ 1
USP6NL-204ENST00000606752 KHDC1Q4VXA5 237 aaKnown RBP21.27■■□□□ 1
USP6NL-204ENST00000606752 LACTB2Q53H82 288 aaPredicted RBP21.27■■□□□ 1
USP6NL-204ENST00000606752 MYO1HQ8N1T3 1032 aa21.27■■□□□ 1
USP6NL-204ENST00000606752 TRMOQ9BU70 441 aa21.27■■□□□ 1
USP6NL-204ENST00000606752 EML4Q9HC35 981 aaKnown RBP21.27■■□□□ 1
USP6NL-204ENST00000606752 MBD1Q9UIS9 605 aaPredicted RBP21.27■■□□□ 1
USP6NL-204ENST00000606752 TMCO1Q9UM00 188 aa21.27■■□□□ 1
USP6NL-204ENST00000606752 CKAP5Q14008 2032 aa21.27■■□□□ 1
USP6NL-204ENST00000606752 QSOX1O00391 747 aa21.27■□□□□ 0.99
USP6NL-204ENST00000606752 HGSO14964 777 aaPredicted RBP21.27■□□□□ 0.99
USP6NL-204ENST00000606752 KLK8O60259 260 aa21.27■□□□□ 0.99
USP6NL-204ENST00000606752 ADAM23O75077 832 aa21.27■□□□□ 0.99
USP6NL-204ENST00000606752 MPSTP25325 297 aa21.27■□□□□ 0.99
USP6NL-204ENST00000606752 AOAHP28039 575 aa21.27■□□□□ 0.99
USP6NL-204ENST00000606752 TAS2R38P59533 333 aa21.27■□□□□ 0.99
USP6NL-204ENST00000606752 MRPS21P82921 87 aaKnown RBP21.27■□□□□ 0.99
USP6NL-204ENST00000606752 GALNT1Q10472 559 aaPredicted RBP21.27■□□□□ 0.99
USP6NL-204ENST00000606752 FRMD7Q6ZUT3 714 aa21.27■□□□□ 0.99
USP6NL-204ENST00000606752 ADAMTSL2Q86TH1 951 aa21.27■□□□□ 0.99
USP6NL-204ENST00000606752 MTDHQ86UE4 582 aaKnown RBP21.27■□□□□ 0.99
USP6NL-204ENST00000606752 CACUL1Q86Y37 369 aa21.27■□□□□ 0.99
USP6NL-204ENST00000606752 FBXO39Q8N4B4 442 aa21.27■□□□□ 0.99
USP6NL-204ENST00000606752 HLA-CQ95604 372 aa21.27■□□□□ 0.99
USP6NL-204ENST00000606752 EYSQ5T1H1 3165 aa21.26■□□□□ 0.99
USP6NL-204ENST00000606752 EIF3FO00303 357 aaPredicted RBP21.26■□□□□ 0.99
USP6NL-204ENST00000606752 ZNF195O14628 629 aa21.26■□□□□ 0.99
USP6NL-204ENST00000606752 SUPT7LO94864 414 aa21.26■□□□□ 0.99
USP6NL-204ENST00000606752 SOD1P00441 154 aa21.26■□□□□ 0.99
USP6NL-204ENST00000606752 HOXB2P14652 356 aa21.26■□□□□ 0.99
USP6NL-204ENST00000606752 SMAD2Q15796 467 aaKnown RBP21.26■□□□□ 0.99
USP6NL-204ENST00000606752 GALNTL6Q49A17 601 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms