RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 MOCOSQ96EN8 888 aa12.12□□□□□ -0.47
HLA-F-230ENST00000606273 RBM15Q96T37 977 aaKnown RBP eCLIP12.12□□□□□ -0.47
HLA-F-230ENST00000606273 HEPHQ9BQS7 1158 aa12.12□□□□□ -0.47
HLA-F-230ENST00000606273 EFHD1Q9BUP0 239 aa12.12□□□□□ -0.47
HLA-F-230ENST00000606273 CYP4F12Q9HCS2 524 aa12.12□□□□□ -0.47
HLA-F-230ENST00000606273 ITM2BQ9Y287 266 aa12.12□□□□□ -0.47
HLA-F-230ENST00000606273 PCDHA3Q9Y5H8 950 aa12.12□□□□□ -0.47
HLA-F-230ENST00000606273 C16orf96A6NNT2 1141 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 USP27XA6NNY8 438 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 KRT86O43790 486 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 PRAMEF11O60813 436 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 TIAF1O95411 115 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 PEX11BO96011 259 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 TCN2P20062 427 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 SERPINH1P50454 418 aaKnown RBP12.11□□□□□ -0.47
HLA-F-230ENST00000606273 OR1D5P58170 312 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 SRP54P61011 504 aaKnown RBP12.11□□□□□ -0.47
HLA-F-230ENST00000606273 MC1RQ01726 317 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 PAFAH1B3Q15102 231 aaKnown RBP12.11□□□□□ -0.47
HLA-F-230ENST00000606273 CYTH1Q15438 398 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 CLPPQ16740 277 aaPredicted RBP12.11□□□□□ -0.47
HLA-F-230ENST00000606273 AMZ1Q400G9 498 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 CARD16Q5EG05 197 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 DCAF12Q5T6F0 453 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 SLC9A4Q6AI14 798 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 SPOCD1Q6ZMY3 1216 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 ZNF354CQ86Y25 554 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 NLGN4XQ8N0W4 816 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 RNF10Q8N5U6 811 aaKnown RBP12.11□□□□□ -0.47
HLA-F-230ENST00000606273 TP53I13Q8NBR0 393 aaPredicted RBP12.11□□□□□ -0.47
HLA-F-230ENST00000606273 NLGN4YQ8NFZ3 816 aaPredicted RBP12.11□□□□□ -0.47
HLA-F-230ENST00000606273 NUDT22Q9BRQ3 303 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 TSGA10Q9BZW7 698 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 SLC39A1Q9NY26 324 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 DDX56Q9NY93 547 aaKnown RBP12.11□□□□□ -0.47
HLA-F-230ENST00000606273 SAE1Q9UBE0 346 aaPredicted RBP12.11□□□□□ -0.47
HLA-F-230ENST00000606273 ERRFI1Q9UJM3 462 aaPredicted RBP12.11□□□□□ -0.47
HLA-F-230ENST00000606273 KCTD3Q9Y597 815 aa12.11□□□□□ -0.47
HLA-F-230ENST00000606273 hCG_1818297A0A087WSY0 165 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 TCP11X1B4DZS4 312 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 AREL1O15033 823 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 MAFKO60675 156 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 TM7SF2O76062 418 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 LDLRP01130 860 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 PYGMP11217 842 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 PRF1P14222 555 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 CD1CP29017 333 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 GKP32189 559 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 ETFBP38117 255 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 DNA2P51530 1060 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 DYNLT1P63172 113 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 GSTM4Q03013 218 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 LCE3BQ5TA77 95 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 KAZNQ674X7 775 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 KCTD16Q68DU8 428 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 B4GALNT4Q76KP1 1039 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 TIPARPQ7Z3E1 657 aaKnown RBP12.1□□□□□ -0.47
HLA-F-230ENST00000606273 PEX26Q7Z412 305 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 MAP7D3Q8IWC1 876 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 SLC34A3Q8N130 599 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 TXLNBQ8N3L3 684 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 AGBL5Q8NDL9 886 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 STARD8Q92502 1023 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 TCTN2Q96GX1 697 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 HES6Q96HZ4 224 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 CCDC74BQ96LY2 380 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 OCIAD1Q9NX40 245 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 TRMT1Q9NXH9 659 aaKnown RBP12.1□□□□□ -0.47
HLA-F-230ENST00000606273 DTLQ9NZJ0 730 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 LHX3Q9UBR4 397 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 TLK1Q9UKI8 766 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 AMFRQ9UKV5 643 aa12.1□□□□□ -0.47
HLA-F-230ENST00000606273 SDK2Q58EX2 2172 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 ARHGAP42A6NI28 874 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 ZNF487B1APH4 448 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 B4E171 279 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 TMCC1O94876 653 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 ZRANB2O95218 330 aaKnown RBP eCLIP12.09□□□□□ -0.47
HLA-F-230ENST00000606273 TNFP01375 233 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 DRD2P14416 443 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 PECAM1P16284 738 aaPredicted RBP12.09□□□□□ -0.47
HLA-F-230ENST00000606273 HTR1BP28222 390 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 ALDH4A1P30038 563 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 TSPAN7P41732 249 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 RGRP47804 291 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 CCNHP51946 323 aaPredicted RBP12.09□□□□□ -0.47
HLA-F-230ENST00000606273 LIMK2P53671 638 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 SLC10A7Q0GE19 358 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 MRPL49Q13405 166 aaKnown RBP12.09□□□□□ -0.47
HLA-F-230ENST00000606273 TRA2AQ13595 282 aaKnown RBP eCLIP12.09□□□□□ -0.47
HLA-F-230ENST00000606273 IFI16Q16666 785 aaKnown RBP12.09□□□□□ -0.47
HLA-F-230ENST00000606273 ATXN7L2Q5T6C5 722 aaPredicted RBP12.09□□□□□ -0.47
HLA-F-230ENST00000606273 ANKS6Q68DC2 871 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 RETSATQ6NUM9 610 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 TAF8Q7Z7C8 310 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 VSIG1Q86XK7 387 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 RFX6Q8HWS3 928 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 RCOR2Q8IZ40 523 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 LZTR1Q8N653 840 aa12.09□□□□□ -0.47
HLA-F-230ENST00000606273 OR6K2Q8NGY2 324 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms