RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 CHKBQ9Y259 395 aa11.54□□□□□ -0.56
PDLIM1P1-201ENST00000604187 NTNG1Q9Y2I2 539 aa11.54□□□□□ -0.56
PDLIM1P1-201ENST00000604187 POLEQ07864 2286 aa11.54□□□□□ -0.56
PDLIM1P1-201ENST00000604187 PRSS44E7EML9 344 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 H3BRJ5 948 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 ZG16O60844 167 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 JCHAINP01591 159 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 KLK3P07288 261 aaPredicted RBP11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 RAB40ALP0C0E4 278 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 ZNF7P17097 686 aaPredicted RBP11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 AMPD1P23109 780 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 IL4RP24394 825 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 MIPP30301 263 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 SPINT3P49223 89 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 ZNF135P52742 658 aaPredicted RBP11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 TUBB4BP68371 445 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 HSD11B2P80365 405 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 DSC2Q02487 901 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 MAMLD1Q13495 774 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 TUBB2AQ13885 445 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 IHHQ14623 411 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 ZRSR2Q15696 482 aaKnown RBP11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 GPR19Q15760 415 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 DNTTIP2Q5QJE6 756 aaKnown RBP11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 LYPLAL1Q5VWZ2 237 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 ALS2CLQ60I27 953 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 ADGRG6Q86SQ4 1221 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 PSTKQ8IV42 348 aaKnown RBP11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 RAVER1Q8IY67 606 aaKnown RBP11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 MCOLN2Q8IZK6 566 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 ZBTB2Q8N680 514 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 INPP5DQ92835 1189 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 SGSM3Q96HU1 749 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 PCMTD1Q96MG8 357 aaPredicted RBP11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 BARD1Q99728 777 aaKnown RBP11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 MAP3K3Q99759 626 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 TUBB2BQ9BVA1 445 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 POLR1EQ9GZS1 481 aaKnown RBP11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 DTLQ9NZJ0 730 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 PKD2L2Q9NZM6 624 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 TTLL3Q9Y4R7 772 aa11.53□□□□□ -0.56
PDLIM1P1-201ENST00000604187 DNHD1Q96M86 4753 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 MEN1O00255 615 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 CHUKO15111 745 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 KMOO15229 486 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 MTX2O75431 263 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 SLC25A14O95258 325 aaPredicted RBP11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 PRLP01236 227 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ALPPP05187 535 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 IDSP22304 550 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 GSDMDP57764 484 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ZXDCQ2QGD7 858 aaPredicted RBP11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ANKRD20A8PQ5CZ79 823 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 CRB2Q5IJ48 1285 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 PLEKHS1Q5SXH7 462 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 PRAMEF17Q5VTA0 474 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 AGAP9Q5VTM2 703 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 HGSNATQ68CP4 663 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 FAM198BQ6UWH4 519 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ABRAXAS1Q6UWZ7 409 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 LRRTM4Q86VH4 590 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 KMT5CQ86Y97 462 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ST6GALNAC3Q8NDV1 305 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ZNF501Q96CX3 271 aaPredicted RBP11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 CSPG4P5Q96PW8 444 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 LYSMD1Q96S90 227 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 AGPAT1Q99943 283 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 TIMM29Q9BSF4 260 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 SPATA16Q9BXB7 569 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 NLNQ9BYT8 704 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 TRIM7Q9C029 511 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 RUBCNLQ9H714 662 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 TRIM39Q9HCM9 518 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 AGPAT4Q9NRZ5 378 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 KCND1Q9NSA2 647 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 SAMSN1Q9NSI8 373 aaKnown RBP11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 OSGIN2Q9Y236 505 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 PCDHGA10Q9Y5H3 936 aa11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 TNRC6AQ8NDV7 1962 aaKnown RBP11.52□□□□□ -0.57
PDLIM1P1-201ENST00000604187 UBA6A0AVT1 1052 aaPredicted RBP11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 RGSL1A5PLK6 1076 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 TLCD2A6NGC4 264 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 GPR89AB7ZAQ6 455 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 DDX3YO15523 660 aaKnown RBP11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 RNF8O76064 485 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 SLC4A1P02730 911 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 GPR89BP0CG08 455 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 CA4P22748 312 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 FECHP22830 423 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 EEF1GP26641 437 aaKnown RBP11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 OTX2P32243 289 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ARL4AP40617 200 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 GLRBP48167 497 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 RPL26P61254 145 aaKnown RBP11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 PLCL1Q15111 1095 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 SMTNL2Q2TAL5 461 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 DPCR1Q3MIW9 517 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 TCP11X2Q5H9J9 407 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 ACAD10Q6JQN1 1059 aa11.51□□□□□ -0.57
PDLIM1P1-201ENST00000604187 KLHL35Q6PF15 583 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms