RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 FAM58BPP0C7Q3 252 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 PSMA3P25788 255 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 ITGB8P26012 769 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 BDKRB2P30411 391 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 ARHGAP25P42331 645 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 CLK1P49759 484 aaKnown RBP4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 TAS2R38P59533 333 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 COL10A1Q03692 680 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 AP1B1Q10567 949 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 COASYQ13057 564 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 MTX1Q13505 466 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 ZXDCQ2QGD7 858 aaPredicted RBP4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 C2orf76Q3KRA6 126 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 ANKRD20A4Q4UJ75 823 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 ANKRD20A8PQ5CZ79 823 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 GLRA4Q5JXX5 417 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 ANKRD20A2Q5SQ80 823 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 ANKRD20A1Q5TYW2 823 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 ANKRD20A3Q5VUR7 823 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 DCAF12L2Q5VW00 463 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 FAM91A1Q658Y4 838 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 FAM109BQ6ICB4 259 aaPredicted RBP4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 TATDN1Q6P1N9 297 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 FIGLAQ6QHK4 219 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 MOXD1Q6UVY6 613 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 SLC36A4Q6YBV0 504 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 ZNF534Q76KX8 674 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 ATG9AQ7Z3C6 839 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 ZC3HC1Q86WB0 502 aaKnown RBP4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 TUSC5Q8IXB3 177 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 GCSAMQ8N6F7 178 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 EMC1Q8N766 993 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 SLC4A11Q8NBS3 891 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 CTCFLQ8NI51 663 aaPredicted RBP4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 MPLKIPQ8TAP9 179 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 GRAPLQ8TC17 118 aaPredicted RBP4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 ERLEC1Q96DZ1 483 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 CABS1Q96KC9 395 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 APOLD1Q96LR9 279 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 LRFN5Q96NI6 719 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 MUS81Q96NY9 551 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 PI4K2AQ9BTU6 479 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 MMTAG2Q9BU76 263 aaKnown RBP4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 FAM234AQ9H0X4 552 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 FZD8Q9H461 694 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 IL1RAPL2Q9NP60 686 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 ABCB8Q9NUT2 735 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 RCC2Q9P258 522 aaKnown RBP4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 TINAGQ9UJW2 476 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 COG5Q9UP83 839 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 MYRFQ9Y2G1 1151 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 KCNK7Q9Y2U2 307 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 ZMYM2Q9UBW7 1377 aa4.09□□□□□ -1.75
AC004542.1-201ENST00000602955 FEZF1A0PJY2 475 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 LRRD1A4D1F6 860 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 GOLGA6L9A6NEM1 432 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 ANKUB1A6NFN9 424 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 OOEPA6NGQ2 149 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 HEPACAM2A8MVW5 462 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 TMEM189-UBE2V1I3L0A0 370 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 I6L893 689 aaPredicted RBP4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 J3QR06 171 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 DDX39AO00148 427 aaKnown RBP4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 ZNF263O14978 683 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 ANKRD28O15084 1053 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 ITM2AO43736 263 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 SSX4O60224 188 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 MED24O75448 989 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 SLC22A3O75751 556 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 THEGLP0DJG4 465 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 ARSBP15848 533 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 KCNA5P22460 613 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 PTPN3P26045 913 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 MPGP29372 298 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 GABRA5P31644 462 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 STX2P32856 288 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 INHBCP55103 352 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 SEC61BP60468 96 aaKnown RBP4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 SNRPEP62304 92 aaKnown RBP4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 SRSF1Q07955 248 aaKnown RBP eCLIP4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 UBE2V1Q13404 147 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 PKN2Q16513 984 aaKnown RBP4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 WASHC2DQ5SRD0 308 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 RNASEH2BQ5TBB1 312 aaKnown RBP4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 SHEQ5VZ18 495 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 ALS2CLQ60I27 953 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 ALKBH5Q6P6C2 394 aaKnown RBP4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 BRAT1Q6PJG6 821 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 C15orf39Q6ZRI6 1047 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 ZBTB49Q6ZSB9 765 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 Q6ZSV7 163 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 C11orf57Q6ZUT1 292 aaPredicted RBP4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 ZNF367Q7RTV3 350 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 TRAPPC11Q7Z392 1133 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 SPATA21Q7Z572 469 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 HOOK3Q86VS8 718 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 PM20D2Q8IYS1 436 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 SYCP3Q8IZU3 236 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 Q8N1X5 172 aa4.08□□□□□ -1.76
AC004542.1-201ENST00000602955 OCC1Q8TAD7 63 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms