RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 FCGR1BQ92637 280 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 INPP4AQ96PE3 977 aaPredicted RBP9.52□□□□□ -0.88
CSMD1-217ENST00000602723 ACO2Q99798 780 aaKnown RBP9.52□□□□□ -0.88
CSMD1-217ENST00000602723 MARK1Q9P0L2 795 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 ASF1AQ9Y294 204 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 SHOX2O60902 331 aaPredicted RBP9.52□□□□□ -0.88
CSMD1-217ENST00000602723 FAM155BO75949 473 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 GNRH1P01148 92 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 IFNA7P01567 189 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 MAGEA12P43365 314 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 RORCP51449 518 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 ZNF155Q12901 538 aaPredicted RBP9.52□□□□□ -0.88
CSMD1-217ENST00000602723 CRTC2Q53ET0 693 aaPredicted RBP9.52□□□□□ -0.88
CSMD1-217ENST00000602723 SMARCD3Q6STE5 483 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 TMEM192Q8IY95 271 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 MEMO1Q9Y316 297 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 FKBP7Q9Y680 259 aa9.52□□□□□ -0.88
CSMD1-217ENST00000602723 LMTK2Q8IWU2 1503 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 ZNF208O43345 1280 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 STK16O75716 305 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 SULT2A1Q06520 285 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 BMT2Q1RMZ1 405 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 C1orf189Q5VU69 101 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 ACAT2Q9BWD1 397 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 EFCAB9A8MZ26 197 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 RPLP0P05388 317 aaKnown RBP9.52□□□□□ -0.89
CSMD1-217ENST00000602723 CCR3P51677 355 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 PRR5P85299 388 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 GTF2BQ00403 316 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 EFR3AQ14156 821 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 CERCAMQ5T4B2 595 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 ADARB2Q9NS39 739 aaKnown RBP9.52□□□□□ -0.89
CSMD1-217ENST00000602723 NRCAMQ92823 1304 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 FAM149AA5PLN7 773 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 RGL2O15211 777 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 SNX4O95219 450 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 DNTTP04053 509 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 CDH12P55289 794 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 PHC1P78364 1004 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 HECTD2Q5U5R9 776 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 PHF24Q9UPV7 400 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 CPSF4LA6NMK7 179 aaKnown RBP9.52□□□□□ -0.89
CSMD1-217ENST00000602723 DCLK1O15075 740 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 NME6O75414 186 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-217ENST00000602723 MATN4O95460 622 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 ITPKBP27987 946 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 AKT2P31751 481 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 CDH13P55290 713 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 LINGO2Q7L985 606 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 CLIP4Q8N3C7 705 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 NKD1Q969G9 470 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 FERD3LQ96RJ6 166 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 IL1RAPQ9NPH3 570 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 ACSS2Q9NR19 701 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 OR2AT4A6NND4 320 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 PSMD9O00233 223 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 RPP40O75818 363 aaKnown RBP9.52□□□□□ -0.89
CSMD1-217ENST00000602723 LAMP2P13473 410 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 HDCP19113 662 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 BMP6P22004 513 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 ARF3P61204 181 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-217ENST00000602723 ARF1P84077 181 aaKnown RBP9.52□□□□□ -0.89
CSMD1-217ENST00000602723 CSTF1Q05048 431 aaKnown RBP9.52□□□□□ -0.89
CSMD1-217ENST00000602723 LCP2Q13094 533 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 ADGRE1Q14246 886 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 SLC25A52Q3SY17 297 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 PPP1R15BQ5SWA1 713 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 CLEC6AQ6EIG7 209 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 SLC43A3Q8NBI5 491 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 MFSD14AQ96MC6 490 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 KLHL5Q96PQ7 755 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 TMEM27Q9HBJ8 222 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 MRPL17Q9NRX2 175 aaKnown RBP9.52□□□□□ -0.89
CSMD1-217ENST00000602723 JCADQ9P266 1359 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 MID1O15344 667 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 HNRNPH3P31942 346 aaKnown RBP9.52□□□□□ -0.89
CSMD1-217ENST00000602723 EPHX2P34913 555 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 OCLNQ16625 522 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 KCTD19Q17RG1 926 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-217ENST00000602723 ALKBH2Q6NS38 261 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 INTS5Q6P9B9 1019 aaKnown RBP9.52□□□□□ -0.89
CSMD1-217ENST00000602723 ZCCHC12Q6PEW1 402 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 ANKRD46Q86W74 232 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 XAGE5Q8WWM1 108 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 GTPBP3Q969Y2 492 aaKnown RBP9.52□□□□□ -0.89
CSMD1-217ENST00000602723 STOX2Q9P2F5 926 aaPredicted RBP9.52□□□□□ -0.89
CSMD1-217ENST00000602723 RIC1Q4ADV7 1423 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 KIDINS220Q9ULH0 1771 aa9.52□□□□□ -0.89
CSMD1-217ENST00000602723 ISM1B1AKI9 464 aa9.51□□□□□ -0.89
CSMD1-217ENST00000602723 CACNB4O00305 520 aaPredicted RBP9.51□□□□□ -0.89
CSMD1-217ENST00000602723 CLDN9O95484 217 aa9.51□□□□□ -0.89
CSMD1-217ENST00000602723 SMIM10L2AP0DMW4 78 aa9.51□□□□□ -0.89
CSMD1-217ENST00000602723 SMIM10L2BP0DMW5 78 aa9.51□□□□□ -0.89
CSMD1-217ENST00000602723 NR4A1P22736 598 aa9.51□□□□□ -0.89
CSMD1-217ENST00000602723 GTF2H2Q13888 395 aa9.51□□□□□ -0.89
CSMD1-217ENST00000602723 C9orf64Q5T6V5 341 aa9.51□□□□□ -0.89
CSMD1-217ENST00000602723 GTF2H2CQ6P1K8 395 aa9.51□□□□□ -0.89
CSMD1-217ENST00000602723 PARGQ86W56 976 aa9.51□□□□□ -0.89
CSMD1-217ENST00000602723 SPOCK2Q92563 424 aa9.51□□□□□ -0.89
CSMD1-217ENST00000602723 CRELD1Q96HD1 420 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms