RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	MAX	P61244	160 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	SH3BP2	P78314	561 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	AP1B1	Q10567	949 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	SLC10A2	Q12908	348 aa	Predicted RBP	18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	IL11RA	Q14626	422 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	PDK1	Q15118	436 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	RALGPS1	Q5JS13	557 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	PAPD7	Q5XG87	772 aa	Known RBP	18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	SPOCD1	Q6ZMY3	1216 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	RFLNA	Q6ZTI6	216 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	TSPAN33	Q86UF1	283 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	RASGRP3	Q8IV61	690 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	SYCE1	Q8N0S2	351 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	EXD1	Q8NHP7	514 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	HDAC11	Q96DB2	347 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	OR6C1	Q96RD1	312 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	POLR1E	Q9GZS1	481 aa	Known RBP	18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	RBM22	Q9NW64	420 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	PHTF1	Q9UMS5	762 aa		18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	18.19	■□□□□ 0.5
LTBP4-231	ENST00000602251	PDZD2	O15018	2839 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	CCDC66	A2RUB6	948 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251		A6NCN8	305 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	CST8	O60676	142 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	SOCS5	O75159	536 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	CP	P00450	1065 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	C9	P02748	559 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	CYP2A6	P11509	494 aa	Predicted RBP	18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	NFKBIA	P25963	317 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	GFER	P55789	205 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	LLGL1	Q15334	1064 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	PEX26	Q7Z412	305 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	SLC9B2	Q86UD5	537 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	PGBD5	Q8N414	524 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	CT55	Q8WUE5	264 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	AP2M1	Q96CW1	435 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	SCRN2	Q96FV2	425 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	ELMO2	Q96JJ3	720 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	MGME1	Q9BQP7	344 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	TSGA10	Q9BZW7	698 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	ABCG8	Q9H221	673 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	ACTL8	Q9H568	366 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	AMACR	Q9UHK6	382 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	ZNHIT2	Q9UHR6	403 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	CD84	Q9UIB8	345 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	AMFR	Q9UKV5	643 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251	PRKAB1	Q9Y478	270 aa		18.18	■□□□□ 0.5
LTBP4-231	ENST00000602251		A0A0U1RQS6	177 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	KRT86	O43790	486 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	SPAG6	O75602	509 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	CES1	P23141	567 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	CTNNA1	P35221	906 aa	Known RBP	18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	NR2C2	P49116	596 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	SEPHS1	P49903	392 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	CCL11	P51671	97 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	PPID	Q08752	370 aa	Known RBP	18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	CCDC181	Q5TID7	509 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	CPZ	Q66K79	652 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	JMJD6	Q6NYC1	403 aa	Predicted RBP	18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	NPNT	Q6UXI9	565 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	CHST15	Q7LFX5	561 aa	Predicted RBP	18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	TEX26	Q8N6G2	289 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251		Q8NA96	180 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	LRRN4	Q8WUT4	740 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	THAP4	Q8WY91	577 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	MAML1	Q92585	1016 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	ANP32B	Q92688	251 aa	Known RBP	18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	KRT35	Q92764	455 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	P3H4	Q92791	437 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	SCAMP4	Q969E2	229 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	FATE1	Q969F0	183 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	COX14	Q96I36	57 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	MCCC1	Q96RQ3	725 aa	Predicted RBP	18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	SLC29A3	Q9BZD2	475 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	BRD8	Q9H0E9	1235 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	ZNF768	Q9H5H4	540 aa	Known RBP	18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	NOD2	Q9HC29	1040 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	LHX9	Q9NQ69	397 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	OGFR	Q9NZT2	677 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	TRIM10	Q9UDY6	481 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	LNPEP	Q9UIQ6	1025 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	PCDHA3	Q9Y5H8	950 aa		18.17	■□□□□ 0.5
LTBP4-231	ENST00000602251	ZFHX3	Q15911	3703 aa		18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	C21orf140	B9A014	251 aa		18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	DNAJC6	O75061	913 aa		18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	PTMA	P06454	111 aa	Known RBP	18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	FGF5	P12034	268 aa		18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	CA4	P22748	312 aa		18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	MARCKSL1	P49006	195 aa		18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	RWDD2B	P57060	319 aa		18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	COPS2	P61201	443 aa		18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	CHAF1B	Q13112	559 aa		18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	NLRP8	Q86W28	1048 aa		18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	LRRC8A	Q8IWT6	810 aa		18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	UBL4B	Q8N7F7	174 aa		18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	AGAP2	Q99490	1192 aa		18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	HERPUD2	Q9BSE4	406 aa		18.16	■□□□□ 0.5
LTBP4-231	ENST00000602251	LUZP4	Q9P127	313 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms