RNA–Protein interactions for RNA: ENST00000601697.5

PSMC4-206, Transcript of proteasome 26S subunit, ATPase 4, human

TSL 2

Gene PSMC4, Length 1,623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC4-206	ENST00000601697	PTGDR2	Q9Y5Y4	395 aa		13.96	□□□□□ -0.17
PSMC4-206	ENST00000601697	ALPK3	Q96L96	1907 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697		A0A1B0GVM2	712 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	FAM234B	A2RU67	622 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	CARNS1	A5YM72	827 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	CDC7	O00311	574 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	IFRD1	O00458	451 aa	Predicted RBP	13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	PPP6C	O00743	305 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	COCH	O43405	550 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	GJB5	O95377	273 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	ESR1	P03372	595 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	UROD	P06132	367 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	SLC6A4	P31645	630 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	MC4R	P32245	332 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	PTGER3	P43115	390 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	ADAR	P55265	1226 aa	Known RBP	13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	PLOD1	Q02809	727 aa	Predicted RBP	13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	TAF12	Q16514	161 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	EML3	Q32P44	896 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	ZRANB3	Q5FWF4	1079 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	NHSL2	Q5HYW2	709 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	PITRM1	Q5JRX3	1037 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	FAM117B	Q6P1L5	589 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	SYVN1	Q86TM6	617 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	PROSER1	Q86XN7	944 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	PTRH1	Q86Y79	214 aa	Known RBP	13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	SPPL2C	Q8IUH8	684 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	SPNS2	Q8IVW8	549 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	CMTR2	Q8IYT2	770 aa	Known RBP	13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	TRPV3	Q8NET8	790 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	ZFP28	Q8NHY6	868 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	OSCP1	Q8WVF1	389 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	TMEM125	Q96AQ2	219 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	MYEOV	Q96EZ4	313 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	LINGO1	Q96FE5	620 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	SLC29A1	Q99808	456 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	ALG2	Q9H553	416 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	ETAA1	Q9NY74	926 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	SPG21	Q9NZD8	308 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	GIMAP2	Q9UG22	337 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	TNPO3	Q9Y5L0	923 aa	Known RBP	13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697	RAI2	Q9Y5P3	530 aa		13.95	□□□□□ -0.18
PSMC4-206	ENST00000601697		A0A087WXM4	84 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	SAC3D1	A6NKF1	404 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697		H7C0S8	307 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	BMP10	O95393	424 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	ASL	P04424	464 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	POLR2J	P52435	117 aa	Known RBP	13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	ESRRG	P62508	458 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	DEFB103A	P81534	67 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	PLD1	Q13393	1074 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	CAPRIN1	Q14444	709 aa	Known RBP	13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	ATP6AP1	Q15904	470 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	ATP6AP1L	Q52LC2	224 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	SETMAR	Q53H47	684 aa	Predicted RBP	13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	ZNF783	Q6ZMS7	281 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	FRA10AC1	Q70Z53	315 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	TMCO2	Q7Z6W1	182 aa	Predicted RBP	13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	TBC1D21	Q8IYX1	336 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	ADGRG5	Q8IZF4	528 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	TMEM199	Q8N511	208 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	MDGA1	Q8NFP4	955 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	TFAP2C	Q92754	450 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	TRMT2B	Q96GJ1	504 aa	Known RBP	13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	ABHD8	Q96I13	439 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	RC3H2	Q9HBD1	1191 aa	Known RBP	13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	CD320	Q9NPF0	282 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	RSL24D1	Q9UHA3	163 aa	Known RBP	13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	EGFL7	Q9UHF1	273 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	ANAPC2	Q9UJX6	822 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	MED16	Q9Y2X0	877 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	PCDHB1	Q9Y5F3	818 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	AK5	Q9Y6K8	562 aa		13.94	□□□□□ -0.18
PSMC4-206	ENST00000601697	RNF103-CHMP3	A0A140T963	221 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697		H3BNC9	293 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	SOCS2	O14508	198 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	EFCAB14	O75071	495 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	BAIAP3	O94812	1187 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	PRSS56	P0CW18	603 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	CHRM3	P20309	590 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	MYF6	P23409	242 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	ALDH3B2	P48448	385 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	GSK3B	P49841	420 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	LIPE	Q05469	1076 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	RAB33A	Q14088	237 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	CYP51A1	Q16850	503 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	DDX53	Q86TM3	631 aa	Known RBP	13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	CBR4	Q8N4T8	237 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	SIDT2	Q8NBJ9	832 aa	Known RBP	13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	GFM2	Q969S9	779 aa	Known RBP	13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	LRCH3	Q96II8	777 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	BIRC8	Q96P09	236 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	SLC52A3	Q9NQ40	469 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	DUS2	Q9NX74	493 aa	Known RBP	13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	ATXN10	Q9UBB4	475 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	FKBPL	Q9UIM3	349 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	PKP3	Q9Y446	797 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	TIMM22	Q9Y584	194 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	LTBP2	Q14767	1821 aa		13.93	□□□□□ -0.18
PSMC4-206	ENST00000601697	NCF1B	A6NI72	391 aa	Predicted RBP	13.93	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms