RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 MSLNQ13421 630 aaPredicted RBP22.24■■□□□ 1.15
CCDC9-204ENST00000599398 SEPT6Q14141 434 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 OASLQ15646 514 aaKnown RBP22.24■■□□□ 1.15
CCDC9-204ENST00000599398 TMEM220Q6QAJ8 160 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 PDZD3Q86UT5 571 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 RCBTB1Q8NDN9 531 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 TRIM58Q8NG06 486 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 OR4D9Q8NGE8 314 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 RTP4Q96DX8 246 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 DPYSL5Q9BPU6 564 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 GRPEL1Q9HAV7 217 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 SCHIP1Q9P0W5 487 aaPredicted RBP22.24■■□□□ 1.15
CCDC9-204ENST00000599398 PPP2R2CQ9Y2T4 447 aa22.24■■□□□ 1.15
CCDC9-204ENST00000599398 OR2AG2A6NM03 316 aa22.23■■□□□ 1.15
CCDC9-204ENST00000599398 AP2A1O95782 977 aa22.23■■□□□ 1.15
CCDC9-204ENST00000599398 VIPP01282 170 aa22.23■■□□□ 1.15
CCDC9-204ENST00000599398 CSF2RBP32927 897 aa22.23■■□□□ 1.15
CCDC9-204ENST00000599398 HADHAP40939 763 aa22.23■■□□□ 1.15
CCDC9-204ENST00000599398 ZNF140P52738 457 aaPredicted RBP22.23■■□□□ 1.15
CCDC9-204ENST00000599398 CTSCP53634 463 aa22.23■■□□□ 1.15
CCDC9-204ENST00000599398 LIMK2P53671 638 aa22.23■■□□□ 1.15
CCDC9-204ENST00000599398 DRG2P55039 364 aaKnown RBP22.23■■□□□ 1.15
CCDC9-204ENST00000599398 C16orf72Q14CZ0 275 aa22.23■■□□□ 1.15
CCDC9-204ENST00000599398 DET1Q7L5Y6 550 aa22.23■■□□□ 1.15
CCDC9-204ENST00000599398 C11orf96Q7Z7L8 435 aa22.23■■□□□ 1.15
CCDC9-204ENST00000599398 CLEC14AQ86T13 490 aa22.23■■□□□ 1.15
CCDC9-204ENST00000599398 AMZ2Q86W34 360 aa22.23■■□□□ 1.15
CCDC9-204ENST00000599398 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.23■■□□□ 1.15
CCDC9-204ENST00000599398 PIH1D1Q9NWS0 290 aaKnown RBP22.23■■□□□ 1.15
CCDC9-204ENST00000599398 TMEM9Q9P0T7 183 aa22.23■■□□□ 1.15
CCDC9-204ENST00000599398 CRLS1Q9UJA2 301 aa22.23■■□□□ 1.15
CCDC9-204ENST00000599398 CCL22O00626 93 aa22.22■■□□□ 1.15
CCDC9-204ENST00000599398 KLK10O43240 276 aa22.22■■□□□ 1.15
CCDC9-204ENST00000599398 POP7O75817 140 aaKnown RBP22.22■■□□□ 1.15
CCDC9-204ENST00000599398 PBLDP30039 288 aaPredicted RBP22.22■■□□□ 1.15
CCDC9-204ENST00000599398 SLC5A2P31639 672 aa22.22■■□□□ 1.15
CCDC9-204ENST00000599398 LMAN1P49257 510 aa22.22■■□□□ 1.15
CCDC9-204ENST00000599398 MAPK10P53779 464 aa22.22■■□□□ 1.15
CCDC9-204ENST00000599398 UBE2IP63279 158 aaKnown RBP22.22■■□□□ 1.15
CCDC9-204ENST00000599398 XIAPP98170 497 aa22.22■■□□□ 1.15
CCDC9-204ENST00000599398 CFHR1Q03591 330 aa22.22■■□□□ 1.15
CCDC9-204ENST00000599398 SQSTM1Q13501 440 aa22.22■■□□□ 1.15
CCDC9-204ENST00000599398 POU6F1Q14863 301 aa22.22■■□□□ 1.15
CCDC9-204ENST00000599398 LONRF2Q1L5Z9 754 aa22.22■■□□□ 1.15
CCDC9-204ENST00000599398 CCDC89Q8N998 374 aa22.22■■□□□ 1.15
CCDC9-204ENST00000599398 CCDC97Q96F63 343 aaPredicted RBP22.22■■□□□ 1.15
CCDC9-204ENST00000599398 DNAJC1Q96KC8 554 aaKnown RBP22.22■■□□□ 1.15
CCDC9-204ENST00000599398 WDR70Q9NW82 654 aa22.22■■□□□ 1.15
CCDC9-204ENST00000599398 AHCTF1Q8WYP5 2266 aa22.22■■□□□ 1.15
CCDC9-204ENST00000599398 E7EVH7 732 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 LDB2O43679 373 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 XRCC1P18887 633 aaPredicted RBP22.21■■□□□ 1.15
CCDC9-204ENST00000599398 ITGALP20701 1170 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 ETV5P41161 510 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 EPHA4P54764 986 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 TLE3Q04726 772 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 TRA2AQ13595 282 aaKnown RBP eCLIP22.21■■□□□ 1.15
CCDC9-204ENST00000599398 SNAP47Q5SQN1 464 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 FNBP1LQ5T0N5 605 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 BROXQ5VW32 411 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 TMEM71Q6P5X7 295 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 LINC00523Q86TU6 105 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 NCSTNQ92542 709 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 ULK4Q96C45 1275 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 SGF29Q96ES7 293 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 DCUN1D1Q96GG9 259 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 TBC1D10AQ9BXI6 508 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 DPH1Q9BZG8 443 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 FAM96AQ9H5X1 160 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 ETNK1Q9HBU6 452 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.21■■□□□ 1.15
CCDC9-204ENST00000599398 ZNF624Q9P2J8 865 aaPredicted RBP22.21■■□□□ 1.15
CCDC9-204ENST00000599398 PCDHGA7Q9Y5G6 932 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 SLC30A1Q9Y6M5 507 aa22.21■■□□□ 1.15
CCDC9-204ENST00000599398 GOLGA6L3A6NEY3 463 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 PRR19A6NJB7 356 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 OR52A4PA6NMU1 304 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 HGSO14964 777 aaPredicted RBP22.2■■□□□ 1.14
CCDC9-204ENST00000599398 KCNJ13O60928 360 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 FGGP02679 453 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 THRAP10827 490 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 BRAFP15056 766 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 MC4RP32245 332 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 FDFT1P37268 417 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 SLC19A1P41440 591 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 HALP42357 657 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 ABRAXAS1Q6UWZ7 409 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 PRUNE1Q86TP1 453 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 BEND7Q8N7W2 519 aaPredicted RBP22.2■■□□□ 1.14
CCDC9-204ENST00000599398 DNAAF3Q8N9W5 541 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 NAT14Q8WUY8 206 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 CXorf40BQ96DE9 158 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 ZNF514Q96K75 400 aaPredicted RBP22.2■■□□□ 1.14
CCDC9-204ENST00000599398 TLR10Q9BXR5 811 aa22.2■■□□□ 1.14
CCDC9-204ENST00000599398 DNMT3AQ9Y6K1 912 aaPredicted RBP22.2■■□□□ 1.14
CCDC9-204ENST00000599398 LILRA5A6NI73 299 aa22.19■■□□□ 1.14
CCDC9-204ENST00000599398 ERI2A8K979 691 aaKnown RBP22.19■■□□□ 1.14
CCDC9-204ENST00000599398 A8MU76 341 aa22.19■■□□□ 1.14
CCDC9-204ENST00000599398 CEP104O60308 925 aa22.19■■□□□ 1.14
CCDC9-204ENST00000599398 GAS8O95995 478 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms