RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 OR52A4PA6NMU1 304 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 HGSO14964 777 aaPredicted RBP11.94□□□□□ -0.5
LIG1-217ENST00000599165 NVLO15381 856 aaKnown RBP11.94□□□□□ -0.5
LIG1-217ENST00000599165 PPFIA2O75334 1257 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 SRP72O76094 671 aaKnown RBP11.94□□□□□ -0.5
LIG1-217ENST00000599165 PRSS56P0CW18 603 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 TPH1P17752 444 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 XRCC1P18887 633 aaPredicted RBP11.94□□□□□ -0.5
LIG1-217ENST00000599165 PSMA3P25788 255 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 RPL10P27635 214 aaKnown RBP11.94□□□□□ -0.5
LIG1-217ENST00000599165 CETN2P41208 172 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 CDKN1CP49918 316 aaPredicted RBP11.94□□□□□ -0.5
LIG1-217ENST00000599165 PRPSAP1Q14558 356 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 SEPT7Q16181 437 aaKnown RBP11.94□□□□□ -0.5
LIG1-217ENST00000599165 AGAP9Q5VTM2 703 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 TMEM71Q6P5X7 295 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 WASH2PQ6VEQ5 465 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 ARHGAP22Q7Z5H3 698 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 SLC9B2Q86UD5 537 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 DTX1Q86Y01 620 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 TRAPPC5Q8IUR0 188 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 TXLNBQ8N3L3 684 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 TAB3Q8N5C8 712 aaPredicted RBP11.94□□□□□ -0.5
LIG1-217ENST00000599165 BEND7Q8N7W2 519 aaPredicted RBP11.94□□□□□ -0.5
LIG1-217ENST00000599165 GPR150Q8NGU9 434 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 ZNF398Q8TD17 642 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 SNRNP27Q8WVK2 155 aaKnown RBP11.94□□□□□ -0.5
LIG1-217ENST00000599165 USP7Q93009 1102 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 TMEM159Q96B96 161 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 FCRL3Q96P31 734 aaPredicted RBP11.94□□□□□ -0.5
LIG1-217ENST00000599165 SLC38A3Q99624 504 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 CMKLR1Q99788 373 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 DPH1Q9BZG8 443 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 TSGA10Q9BZW7 698 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 OSGEPL1Q9H4B0 414 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 WASH6PQ9NQA3 447 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 PIH1D1Q9NWS0 290 aaKnown RBP11.94□□□□□ -0.5
LIG1-217ENST00000599165 OCIAD1Q9NX40 245 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■■■□ 22.1
LIG1-217ENST00000599165 PKP3Q9Y446 797 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 ATMQ13315 3056 aa11.94□□□□□ -0.5
LIG1-217ENST00000599165 MN1Q10571 1320 aaPredicted RBP11.93□□□□□ -0.5
LIG1-217ENST00000599165 TRBV5-4A0A0C4DH59 114 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 GOLGA6L9A6NEM1 432 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 OR2AG2A6NM03 316 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 OR5K4A6NMS3 321 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 POP7O75817 140 aaKnown RBP11.93□□□□□ -0.5
LIG1-217ENST00000599165 STK10O94804 968 aaKnown RBP11.93□□□□□ -0.5
LIG1-217ENST00000599165 AP2A1O95782 977 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 JMJD7P0C870 316 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 ETS1P14921 441 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 WT1P19544 449 aaPredicted RBP11.93□□□□□ -0.5
LIG1-217ENST00000599165 GRIA1P42261 906 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 MAPK10P53779 464 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 EPHA4P54764 986 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 GFERP55789 205 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 TMPRSS15P98073 1019 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 TRA2AQ13595 282 aaKnown RBP eCLIP11.93□□□□□ -0.53e-6■□□□□ 10
LIG1-217ENST00000599165 ITGA9Q13797 1035 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 NFE2L1Q14494 772 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 KCTD19Q17RG1 926 aaPredicted RBP11.93□□□□□ -0.5
LIG1-217ENST00000599165 ZNF658BQ4V348 819 aaPredicted RBP11.93□□□□□ -0.5
LIG1-217ENST00000599165 LDLRAP1Q5SW96 308 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 TMEM220Q6QAJ8 160 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 WDR74Q6RFH5 385 aaPredicted RBP11.93□□□□□ -0.5
LIG1-217ENST00000599165 ARHGEF18Q6ZSZ5 1173 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 TMEM26Q6ZUK4 368 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 ZFAND4Q86XD8 727 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 LILRA3Q8N6C8 439 aaPredicted RBP11.93□□□□□ -0.5
LIG1-217ENST00000599165 CCDC112Q8NEF3 446 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 GDAP1Q8TB36 358 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 C1orf54Q8WWF1 131 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 SGF29Q96ES7 293 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 DNAJC1Q96KC8 554 aaKnown RBP11.93□□□□□ -0.5
LIG1-217ENST00000599165 C19orf43Q9BQ61 176 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 TLR10Q9BXR5 811 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 UCK1Q9HA47 277 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 SLC40A1Q9NP59 571 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 LZTFL1Q9NQ48 299 aa11.93□□□□□ -0.5
LIG1-217ENST00000599165 IGLV3-16A0A075B6K0 115 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 C2orf81A6NN90 581 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 PDZK1P1A8MUH7 402 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.92□□□□□ -0.5
LIG1-217ENST00000599165 H7C0S8 307 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 KRT86O43790 486 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 DUX1O43812 170 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 C9P02748 559 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 SLC2A4P14672 509 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 TNNT3P45378 269 aaPredicted RBP11.92□□□□□ -0.5
LIG1-217ENST00000599165 CXADRP78310 365 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 BIRC2Q13490 618 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 GPR18Q14330 331 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 P3H1Q32P28 736 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 DET1Q7L5Y6 550 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 JAMLQ86YT9 394 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 OR10G6Q8NH81 332 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 RSC1A1Q92681 617 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 FERMT1Q9BQL6 677 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 SPRY4Q9C004 299 aa11.92□□□□□ -0.5
LIG1-217ENST00000599165 FAM96AQ9H5X1 160 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms