RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 APRTP07741 180 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 JMJD7P0C870 316 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 CD1CP29017 333 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 CA5AP35218 305 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 HALP42357 657 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 BASP1P80723 227 aaKnown RBP18.87■□□□□ 0.61
HOMER3-209ENST00000596482 LAMB3Q13751 1172 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 GPR33Q49SQ1 333 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 ZRANB3Q5FWF4 1079 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 FNBP1LQ5T0N5 605 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 LRRC69Q6ZNQ3 347 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 DET1Q7L5Y6 550 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 C11orf96Q7Z7L8 435 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 PRUNE1Q86TP1 453 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 SLITRK4Q8IW52 837 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 REXO1L1PQ8IX06 675 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 NXPE1Q8N323 547 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 HEXDCQ8WVB3 486 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 PBKQ96KB5 322 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 COPS8Q99627 209 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 CMKLR1Q99788 373 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 EPG5Q9HCE0 2579 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 LOXL2Q9Y4K0 774 aa18.87■□□□□ 0.61
HOMER3-209ENST00000596482 A0A1W2PNU3 283 aaPredicted RBP18.86■□□□□ 0.61
HOMER3-209ENST00000596482 HEATR9A2RTY3 570 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 POP7O75817 140 aaKnown RBP18.86■□□□□ 0.61
HOMER3-209ENST00000596482 TNFSF15O95150 251 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 VIPP01282 170 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 ITGA2BP08514 1039 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 ZSCAN5DPP0CG00 497 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 RPL10P27635 214 aaKnown RBP18.86■□□□□ 0.61
HOMER3-209ENST00000596482 MAPK9P45984 424 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 EPHA4P54764 986 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 DRG2P55039 364 aaKnown RBP18.86■□□□□ 0.61
HOMER3-209ENST00000596482 ZFP36L1Q07352 338 aaKnown RBP18.86■□□□□ 0.61
HOMER3-209ENST00000596482 DMPKQ09013 629 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 AGAP9Q5VTM2 703 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 NKAIN2Q5VXU1 208 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 USP53Q70EK8 1073 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 SLC35F6Q8N357 371 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 GLIS1Q8NBF1 620 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 CXorf40BQ96DE9 158 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 NAP1L3Q99457 506 aaPredicted RBP18.86■□□□□ 0.61
HOMER3-209ENST00000596482 ASCL3Q9NQ33 180 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 EIF2B3Q9NR50 452 aaKnown RBP18.86■□□□□ 0.61
HOMER3-209ENST00000596482 POT1Q9NUX5 634 aa18.86■□□□□ 0.61
HOMER3-209ENST00000596482 TRMT1Q9NXH9 659 aaKnown RBP18.86■□□□□ 0.61
HOMER3-209ENST00000596482 DNMT3AQ9Y6K1 912 aaPredicted RBP18.86■□□□□ 0.61
HOMER3-209ENST00000596482 A0A087WV48 116 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 CCDC78A2IDD5 438 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 PMS2P1A4D2B8 440 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 KLHL33A6NCF5 533 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 LILRA5A6NI73 299 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 PRR19A6NJB7 356 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 H7C0S8 307 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 CSF2RBP32927 897 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 RPL22P35268 128 aaKnown RBP18.85■□□□□ 0.61
HOMER3-209ENST00000596482 EIF2S3P41091 472 aaKnown RBP18.85■□□□□ 0.61
HOMER3-209ENST00000596482 ABCG1P45844 678 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 UBE2IP63279 158 aaKnown RBP18.85■□□□□ 0.61
HOMER3-209ENST00000596482 SKIDA1Q1XH10 827 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 BCL7AQ4VC05 210 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 CCDC38Q502W7 563 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 WASH2PQ6VEQ5 465 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 TAS2R42Q7RTR8 314 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 TMPRSS9Q7Z410 1059 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 ZNF248Q8NDW4 579 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 OR4D9Q8NGE8 314 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.85■□□□□ 0.61
HOMER3-209ENST00000596482 CCDC74BQ96LY2 380 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 SLC46A1Q96NT5 459 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 SEMA6CQ9H3T2 930 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 EPB41L1Q9H4G0 881 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 FAM96AQ9H5X1 160 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 WASH6PQ9NQA3 447 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 SCHIP1Q9P0W5 487 aaPredicted RBP18.85■□□□□ 0.61
HOMER3-209ENST00000596482 PISDQ9UG56 409 aa18.85■□□□□ 0.61
HOMER3-209ENST00000596482 FREM2Q5SZK8 3169 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 AGAP14A8MT82 685 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 PGRMC1O00264 195 aaKnown RBP18.84■□□□□ 0.61
HOMER3-209ENST00000596482 XRCC1P18887 633 aaPredicted RBP18.84■□□□□ 0.61
HOMER3-209ENST00000596482 ACRV1P26436 265 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 KCNJ1P48048 391 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 LIMK2P53671 638 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 CACNG1Q06432 222 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 SQSTM1Q13501 440 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 TRA2AQ13595 282 aaKnown RBP eCLIP18.84■□□□□ 0.61
HOMER3-209ENST00000596482 ABRAXAS1Q6UWZ7 409 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 JAMLQ86YT9 394 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 RBM12BQ8IXT5 1001 aaKnown RBP18.84■□□□□ 0.61
HOMER3-209ENST00000596482 RASGEF1CQ8N431 466 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 PRELID2Q8N945 189 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 PPHLN1Q8NEY8 458 aaKnown RBP18.84■□□□□ 0.61
HOMER3-209ENST00000596482 SGF29Q96ES7 293 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 PRR11Q96HE9 360 aaPredicted RBP18.84■□□□□ 0.61
HOMER3-209ENST00000596482 PDLIM2Q96JY6 352 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 VPS37BQ9H9H4 285 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 UCK1Q9HA47 277 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 CASS4Q9NQ75 786 aa18.84■□□□□ 0.61
HOMER3-209ENST00000596482 ZDHHC3Q9NYG2 299 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms