RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 AAR2Q9Y312 384 aaKnown RBP23.11■■□□□ 1.29
LSM4-204ENST00000594828 B3GALT1Q9Y5Z6 326 aa23.11■■□□□ 1.29
LSM4-204ENST00000594828 GRID2IPA4D2P6 1211 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 LILRA5A6NI73 299 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 PRR19A6NJB7 356 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 STX7O15400 261 aaKnown RBP23.1■■□□□ 1.29
LSM4-204ENST00000594828 KCNN4O15554 427 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 STK10O94804 968 aaKnown RBP23.1■■□□□ 1.29
LSM4-204ENST00000594828 RPL10P27635 214 aaKnown RBP23.1■■□□□ 1.29
LSM4-204ENST00000594828 ARSDP51689 593 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 ITGA9Q13797 1035 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 PRPSAP1Q14558 356 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 LDLRAP1Q5SW96 308 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 DCAF12Q5T6F0 453 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 AADACL2Q6P093 401 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 TMEM26Q6ZUK4 368 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 C11orf96Q7Z7L8 435 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 VASH2Q86V25 355 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 SGF29Q96ES7 293 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 ZCCHC2Q9C0B9 1178 aaKnown RBP23.1■■□□□ 1.29
LSM4-204ENST00000594828 AMFRQ9UKV5 643 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 SMG1Q96Q15 3661 aaKnown RBP23.1■■□□□ 1.29
LSM4-204ENST00000594828 MGAQ8IWI9 3026 aa23.1■■□□□ 1.29
LSM4-204ENST00000594828 KCNJ13O60928 360 aa23.09■■□□□ 1.29
LSM4-204ENST00000594828 RAB15P59190 212 aa23.09■■□□□ 1.29
LSM4-204ENST00000594828 AGAP9Q5VTM2 703 aa23.09■■□□□ 1.29
LSM4-204ENST00000594828 WASH2PQ6VEQ5 465 aa23.09■■□□□ 1.29
LSM4-204ENST00000594828 RANBP10Q6VN20 620 aa23.09■■□□□ 1.29
LSM4-204ENST00000594828 PLXDC1Q8IUK5 500 aa23.09■■□□□ 1.29
LSM4-204ENST00000594828 ZNF843Q8N446 348 aa23.09■■□□□ 1.29
LSM4-204ENST00000594828 JPH3Q8WXH2 748 aaPredicted RBP23.09■■□□□ 1.29
LSM4-204ENST00000594828 WASH6PQ9NQA3 447 aa23.09■■□□□ 1.29
LSM4-204ENST00000594828 KLHL3Q9UH77 587 aa23.09■■□□□ 1.29
LSM4-204ENST00000594828 C2orf81A6NN90 581 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 GPR39O43194 453 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 BRAFP15056 766 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 LPOP22079 712 aaPredicted RBP23.08■■□□□ 1.29
LSM4-204ENST00000594828 PSMB4P28070 264 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 ADRA1AP35348 466 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 DRG2P55039 364 aaKnown RBP23.08■■□□□ 1.29
LSM4-204ENST00000594828 LY6DQ14210 128 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 PTPRCAPQ14761 206 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 TAF1AQ15573 450 aaPredicted RBP23.08■■□□□ 1.29
LSM4-204ENST00000594828 GPRC6AQ5T6X5 926 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 ANKS6Q68DC2 871 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 PEX26Q7Z412 305 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 AMZ2Q86W34 360 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 BMPERQ8N8U9 685 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 RASGEF1AQ8N9B8 481 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 ZSCAN1Q8NBB4 408 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 DDHD1Q8NEL9 900 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 CCDC110Q8TBZ0 833 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 ZNF398Q8TD17 642 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 APOL2Q9BQE5 337 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 TRIM10Q9UDY6 481 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 ARL5AQ9Y689 179 aa23.08■■□□□ 1.29
LSM4-204ENST00000594828 C5orf60A6NFR6 353 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 GAPDHSO14556 408 aaPredicted RBP23.07■■□□□ 1.28
LSM4-204ENST00000594828 POP7O75817 140 aaKnown RBP23.07■■□□□ 1.28
LSM4-204ENST00000594828 UBXN7O94888 489 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 PTMAP06454 111 aaKnown RBP23.07■■□□□ 1.28
LSM4-204ENST00000594828 AMD1P17707 334 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 CA5AP35218 305 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 ATP1A2P50993 1020 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 MC2RQ01718 297 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 KIF5AQ12840 1032 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 TMEM220Q6QAJ8 160 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 TMEM139Q8IV31 216 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 SYCE1Q8N0S2 351 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 TXLNBQ8N3L3 684 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 UBL4BQ8N7F7 174 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 NKD1Q969G9 470 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 CXorf40BQ96DE9 158 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 SPATA13Q96N96 652 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 PPP1R2P1Q96PQ5 205 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 POT1Q9NUX5 634 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 DNMT3AQ9Y6K1 912 aaPredicted RBP23.07■■□□□ 1.28
LSM4-204ENST00000594828 SLC30A1Q9Y6M5 507 aa23.07■■□□□ 1.28
LSM4-204ENST00000594828 OR52A4PA6NMU1 304 aa23.06■■□□□ 1.28
LSM4-204ENST00000594828 ZNF189O75820 626 aaPredicted RBP23.06■■□□□ 1.28
LSM4-204ENST00000594828 TYRP1P17643 537 aa23.06■■□□□ 1.28
LSM4-204ENST00000594828 HALP42357 657 aa23.06■■□□□ 1.28
LSM4-204ENST00000594828 CTSCP53634 463 aa23.06■■□□□ 1.28
LSM4-204ENST00000594828 OLIG2Q13516 323 aa23.06■■□□□ 1.28
LSM4-204ENST00000594828 CLCA4Q14CN2 919 aa23.06■■□□□ 1.28
LSM4-204ENST00000594828 RBM12BQ8IXT5 1001 aaKnown RBP23.06■■□□□ 1.28
LSM4-204ENST00000594828 OR4K2Q8NGD2 314 aa23.06■■□□□ 1.28
LSM4-204ENST00000594828 TEFMQ96QE5 360 aaKnown RBP23.06■■□□□ 1.28
LSM4-204ENST00000594828 SLC40A1Q9NP59 571 aa23.06■■□□□ 1.28
LSM4-204ENST00000594828 FBXO8Q9NRD0 319 aa23.06■■□□□ 1.28
LSM4-204ENST00000594828 SMOXQ9NWM0 555 aa23.06■■□□□ 1.28
LSM4-204ENST00000594828 OGFRQ9NZT2 677 aa23.06■■□□□ 1.28
LSM4-204ENST00000594828 IMPACTQ9P2X3 320 aa23.06■■□□□ 1.28
LSM4-204ENST00000594828 WDR37Q9Y2I8 494 aa23.06■■□□□ 1.28
LSM4-204ENST00000594828 PCDHGA4Q9Y5G9 962 aa23.06■■□□□ 1.28
LSM4-204ENST00000594828 AHCTF1Q8WYP5 2266 aa23.05■■□□□ 1.28
LSM4-204ENST00000594828 GOLGA6L9A6NEM1 432 aa23.05■■□□□ 1.28
LSM4-204ENST00000594828 OR2AG2A6NM03 316 aa23.05■■□□□ 1.28
LSM4-204ENST00000594828 MIF4GDA9UHW6 222 aaKnown RBP23.05■■□□□ 1.28
LSM4-204ENST00000594828 PRAMEF1O95521 474 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms