RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 WHRNQ9P202 907 aa19.39■□□□□ 0.7
LSM4-203ENST00000593829 FTSJ1Q9UET6 329 aa19.39■□□□□ 0.7
LSM4-203ENST00000593829 TDRD6O60522 2096 aaKnown RBP19.39■□□□□ 0.69
LSM4-203ENST00000593829 DCHS1Q96JQ0 3298 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 HEATR9A2RTY3 570 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 MROH6A6NGR9 719 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 TRIM38O00635 465 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 GAPDHSO14556 408 aaPredicted RBP19.39■□□□□ 0.69
LSM4-203ENST00000593829 TCEA3O75764 348 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 PRAMEF1O95521 474 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 GIMD1P0DJR0 217 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 NQO1P15559 274 aaKnown RBP19.39■□□□□ 0.69
LSM4-203ENST00000593829 CCDC38Q502W7 563 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 PPM1JQ5JR12 505 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 EXOC3L1Q86VI1 746 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 ZNF398Q8TD17 642 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 EPS8L3Q8TE67 593 aaKnown RBP19.39■□□□□ 0.69
LSM4-203ENST00000593829 STYXQ8WUJ0 223 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 PTCD2Q8WV60 388 aaKnown RBP19.39■□□□□ 0.69
LSM4-203ENST00000593829 CPT1BQ92523 772 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 DNAJC1Q96KC8 554 aaKnown RBP19.39■□□□□ 0.69
LSM4-203ENST00000593829 RANBP9Q96S59 729 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 TMEM168Q9H0V1 697 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 SUDS3Q9H7L9 328 aaPredicted RBP19.39■□□□□ 0.69
LSM4-203ENST00000593829 NLE1Q9NVX2 485 aaPredicted RBP19.39■□□□□ 0.69
LSM4-203ENST00000593829 BAIAP2L1Q9UHR4 511 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 DOLKQ9UPQ8 538 aa19.39■□□□□ 0.69
LSM4-203ENST00000593829 LRP4O75096 1905 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 TCRBV7S3A2A0A539 114 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 TPP1O14773 563 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 SIGLEC6O43699 453 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 UGT1A9O60656 530 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 LDOC1O95751 146 aaPredicted RBP19.38■□□□□ 0.69
LSM4-203ENST00000593829 ANXA6P08133 673 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 CELA2BP08218 269 aaPredicted RBP19.38■□□□□ 0.69
LSM4-203ENST00000593829 UGT1A6P19224 532 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 UGT1A1P22309 533 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 UGT1A4P22310 534 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 ADRA1DP25100 572 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 UGT1A3P35503 534 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 UGT1A5P35504 534 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 ADCY8P40145 1251 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 NCALDP61601 193 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 BNIP1Q12981 228 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 PTK6Q13882 451 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 TCEA2Q15560 299 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 DEFB133Q30KQ1 61 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 LRRC8BQ6P9F7 803 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 MARK2Q7KZI7 788 aaKnown RBP19.38■□□□□ 0.69
LSM4-203ENST00000593829 GKN2Q86XP6 184 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 RSRC1Q96IZ7 334 aaKnown RBP19.38■□□□□ 0.69
LSM4-203ENST00000593829 CNDP2Q96KP4 475 aaKnown RBP19.38■□□□□ 0.69
LSM4-203ENST00000593829 RMI1Q9H9A7 625 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 UGT1A7Q9HAW7 530 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 UGT1A10Q9HAW8 530 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 UGT1A8Q9HAW9 530 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 TRNAU1APQ9NX07 287 aaKnown RBP19.38■□□□□ 0.69
LSM4-203ENST00000593829 BFARQ9NZS9 450 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 ASIC3Q9UHC3 531 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 TMPRSS11EQ9UL52 423 aa19.38■□□□□ 0.69
LSM4-203ENST00000593829 YY2O15391 372 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 SRP72O76094 671 aaKnown RBP19.37■□□□□ 0.69
LSM4-203ENST00000593829 NPY2RP49146 381 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 SESN2P58004 480 aaPredicted RBP19.37■□□□□ 0.69
LSM4-203ENST00000593829 XIAPP98170 497 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 LVRNQ6Q4G3 990 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 SYDE1Q6ZW31 735 aaPredicted RBP19.37■□□□□ 0.69
LSM4-203ENST00000593829 NLRP9Q7RTR0 991 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 GLRX5Q86SX6 157 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 GALNT13Q8IUC8 556 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 GDAP1Q8TB36 358 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 SCG3Q8WXD2 468 aaKnown RBP19.37■□□□□ 0.69
LSM4-203ENST00000593829 OR2AG1Q9H205 316 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 ATXN10Q9UBB4 475 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 GPSM3Q9Y4H4 160 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 SPAARA0A1B0GVQ0 90 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 GPR89AB7ZAQ6 455 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 TNFSF14O43557 240 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 DNAJC6O75061 913 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 GPR89BP0CG08 455 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 SKIV2L2P42285 1042 aaKnown RBP19.37■□□□□ 0.69
LSM4-203ENST00000593829 SIM1P81133 766 aaPredicted RBP19.37■□□□□ 0.69
LSM4-203ENST00000593829 PYCR3Q53H96 274 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 ZNF648Q5T619 568 aaPredicted RBP19.37■□□□□ 0.69
LSM4-203ENST00000593829 ANKRD22Q5VYY1 191 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 TAF8Q7Z7C8 310 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 OR2M4Q96R27 311 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 IL22Q9GZX6 179 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 ASB8Q9H765 288 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 ABCF3Q9NUQ8 709 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 SMOXQ9NWM0 555 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 ZNHIT2Q9UHR6 403 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 TCAF1Q9Y4C2 921 aa19.37■□□□□ 0.69
LSM4-203ENST00000593829 H7C0S8 307 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 CCL22O00626 93 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 GPR39O43194 453 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 VEGFDO43915 354 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 NUAK1O60285 661 aa19.36■□□□□ 0.69
LSM4-203ENST00000593829 ILF3Q12906 894 aaKnown RBP eCLIP19.36■□□□□ 0.69
LSM4-203ENST00000593829 NFATC2Q13469 925 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms