RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 CORO1BQ9BR76 489 aa14.13□□□□□ -0.15
RANBP3-229ENST00000592771 KIAA1522Q9P206 1035 aaPredicted RBP14.13□□□□□ -0.15
RANBP3-229ENST00000592771 CNOT6Q9ULM6 557 aaKnown RBP14.13□□□□□ -0.15
RANBP3-229ENST00000592771 CLEC4EQ9ULY5 219 aa14.13□□□□□ -0.15
RANBP3-229ENST00000592771 PCDHGB4Q9UN71 923 aa14.13□□□□□ -0.15
RANBP3-229ENST00000592771 PCDHGB5Q9Y5G0 923 aa14.13□□□□□ -0.15
RANBP3-229ENST00000592771 CEPT1Q9Y6K0 416 aa14.13□□□□□ -0.15
RANBP3-229ENST00000592771 HIDE1A8MVS5 230 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 K7ERQ8 282 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 HTRA2O43464 458 aaPredicted RBP14.12□□□□□ -0.15
RANBP3-229ENST00000592771 PGLSO95336 258 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 BMP10O95393 424 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 GJA1P17302 382 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 CDH2P19022 906 aaPredicted RBP14.12□□□□□ -0.15
RANBP3-229ENST00000592771 CD9P21926 228 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 BMPR1AP36894 532 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 FPGSQ05932 587 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 GK3PQ14409 553 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 PPP1R3AQ16821 1122 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 KCTD21Q4G0X4 260 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 SETMARQ53H47 684 aaPredicted RBP14.12□□□□□ -0.15
RANBP3-229ENST00000592771 CYHR1Q6ZMK1 362 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 ZBTB49Q6ZSB9 765 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 METTL3Q86U44 580 aaKnown RBP14.12□□□□□ -0.15
RANBP3-229ENST00000592771 CAMK1DQ8IU85 385 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 ERI1Q8IV48 349 aaKnown RBP14.12□□□□□ -0.15
RANBP3-229ENST00000592771 FAM81AQ8TBF8 368 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 PIH1D2Q8WWB5 315 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 PTERQ96BW5 349 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 RMND5BQ96G75 393 aaPredicted RBP14.12□□□□□ -0.15
RANBP3-229ENST00000592771 C19orf43Q9BQ61 176 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 TMEM79Q9BSE2 394 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 TFB2MQ9H5Q4 396 aaKnown RBP14.12□□□□□ -0.15
RANBP3-229ENST00000592771 CLK4Q9HAZ1 481 aaKnown RBP14.12□□□□□ -0.15
RANBP3-229ENST00000592771 MAGEE1Q9HCI5 957 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 TNFRSF12AQ9NP84 129 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 TMEM45AQ9NWC5 275 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 IL17CQ9P0M4 197 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 RSL24D1Q9UHA3 163 aaKnown RBP14.12□□□□□ -0.15
RANBP3-229ENST00000592771 FKBPLQ9UIM3 349 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 VPS9D1Q9Y2B5 631 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 NOTCH4Q99466 2003 aa14.12□□□□□ -0.15
RANBP3-229ENST00000592771 SCN8AQ9UQD0 1980 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.11□□□□□ -0.15
RANBP3-229ENST00000592771 UBFD1O14562 309 aaKnown RBP14.11□□□□□ -0.15
RANBP3-229ENST00000592771 CCL16O15467 120 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 SMAD6O43541 496 aaKnown RBP14.11□□□□□ -0.15
RANBP3-229ENST00000592771 SLC4A1P02730 911 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 FCGR1AP12314 374 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 IL10P22301 178 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 MAPK8P45983 427 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 CDK9P50750 372 aaKnown RBP14.11□□□□□ -0.15
RANBP3-229ENST00000592771 CLCN4P51793 760 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 SLC7A2P52569 658 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 ATXN3P54252 364 aaPredicted RBP14.11□□□□□ -0.15
RANBP3-229ENST00000592771 NRF1Q16656 503 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 PLEKHG6Q3KR16 790 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 NHSL2Q5HYW2 709 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 LCN8Q6JVE9 175 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 FUNDC1Q8IVP5 155 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 PIANPQ8IYJ0 282 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 MIER2Q8N344 545 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 EFHBQ8N7U6 833 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 B4GALNT2Q8NHY0 566 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 BADQ92934 168 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 BHMTQ93088 406 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 MYO19Q96H55 970 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 ALG9Q9H6U8 611 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 ABCB8Q9NUT2 735 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 INTS6Q9UL03 887 aaKnown RBP14.11□□□□□ -0.15
RANBP3-229ENST00000592771 ZNF711Q9Y462 761 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 PCDHB9Q9Y5E1 797 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 ZNF106Q9H2Y7 1883 aaKnown RBP14.11□□□□□ -0.15
RANBP3-229ENST00000592771 A0A0J9YYE9 177 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 KANSL1LA0AUZ9 987 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 TRIM64CA6NLI5 447 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 ZNF701M0R085 212 aaPredicted RBP14.11□□□□□ -0.15
RANBP3-229ENST00000592771 STX7O15400 261 aaKnown RBP14.11□□□□□ -0.15
RANBP3-229ENST00000592771 SOCS5O75159 536 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 MOSPD3O75425 235 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 ZNF821O75541 412 aaPredicted RBP14.11□□□□□ -0.15
RANBP3-229ENST00000592771 TRMUO75648 421 aaKnown RBP14.11□□□□□ -0.15
RANBP3-229ENST00000592771 FGF19O95750 216 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 DDX6P26196 483 aaKnown RBP eCLIP14.11□□□□□ -0.15
RANBP3-229ENST00000592771 CD70P32970 193 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 KCNC1P48547 511 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 PRKCQQ04759 706 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 RALGDSQ12967 914 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 MTX3Q5HYI7 312 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 ARMC12Q5T9G4 340 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 KANK2Q63ZY3 851 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 HMBOX1Q6NT76 420 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 EFL1Q7Z2Z2 1120 aaKnown RBP14.11□□□□□ -0.15
RANBP3-229ENST00000592771 AMIGO2Q86SJ2 522 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 TNIP2Q8NFZ5 429 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 ADAMTS16Q8TE57 1224 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 TFAP2CQ92754 450 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 BIRC8Q96P09 236 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 SEMA6AQ9H2E6 1030 aa14.11□□□□□ -0.15
RANBP3-229ENST00000592771 AKTIPQ9H8T0 292 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms