RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 MRPL17Q9NRX2 175 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 ARMC1Q9NVT9 282 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 EVLQ9UI08 416 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 C1orf232A0A0U1RR37 186 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 RAD51BO15315 384 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 EEDO75530 441 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 TNFAIP8O95379 198 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 SMIM18P0DKX4 95 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 ITGALP20701 1170 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 ARL1P40616 181 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 GRIA2P42262 883 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 ATP6AP1LQ52LC2 224 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 MTX3Q5HYI7 312 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 SNX20Q7Z614 316 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 OR2T11Q8NH01 316 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 GRIN3AQ8TCU5 1115 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 DDI1Q8WTU0 396 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 ZNF597Q96LX8 424 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 SPATA16Q9BXB7 569 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 NOL11Q9H8H0 719 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 TMEM45AQ9NWC5 275 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 ZIM2Q9NZV7 527 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 SUN2Q9UH99 717 aa16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 TSR3Q9UJK0 312 aaKnown RBP16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 LEF1Q9UJU2 399 aaPredicted RBP16.37■□□□□ 0.21
PRKCSH-217ENST00000592741 CCDC154A6NI56 674 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 BAIAP3O94812 1187 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 TRBC1P01850 177 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 FAM58BPP0C7Q3 252 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 PABPC4LP0CB38 370 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 RGS4P49798 205 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 ERVPABLB-1P60509 514 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 ZXDBP98169 803 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 NRF1Q16656 503 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 LYPLAL1Q5VWZ2 237 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 LCN8Q6JVE9 175 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 SLC30A9Q6PML9 568 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 GOLGA7Q7Z5G4 137 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 MYO1HQ8N1T3 1032 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 FNDC5Q8NAU1 212 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 GOLM1Q8NBJ4 401 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 OR52B6Q8NGF0 335 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 CANT1Q8WVQ1 401 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 AUTS2Q8WXX7 1259 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 ACDQ96AP0 544 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 C19orf43Q9BQ61 176 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 C1orf50Q9BV19 199 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 CIPCQ9C0C6 399 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 MUC13Q9H3R2 512 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 ASB8Q9H765 288 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 IL21Q9HBE4 155 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 APPL1Q9UKG1 709 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 PCDHA9Q9Y5H5 950 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 HTRA2O43464 458 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 SMAD6O43541 496 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 AKAP10O43572 662 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 SYNCRIPO60506 623 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 SOCS5O75159 536 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 TIPRLO75663 272 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 CSNK1DP48730 415 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 POLR2JP52435 117 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 UFM1P61960 85 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 C6orf136Q5SQH8 315 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 HMBOX1Q6NT76 420 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 LETMD1Q6P1Q0 360 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 SBSNQ6UWP8 590 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 ERMP1Q7Z2K6 904 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 AMIGO2Q86SJ2 522 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 DDX53Q86TM3 631 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 ANKFN1Q8N957 763 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 TMEM125Q96AQ2 219 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 SLC45A3Q96JT2 553 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 CDK15Q96Q40 435 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 OSBPL11Q9BXB4 747 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 ZNF696Q9H7X3 374 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 PAK6Q9NQU5 681 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 PAPOLBQ9NRJ5 636 aaKnown RBP16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 CCM2LQ9NUG4 571 aaPredicted RBP16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 PLK2Q9NYY3 685 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 SPG21Q9NZD8 308 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 ACTR3BQ9P1U1 418 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 MAFFQ9ULX9 164 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 TRIM17Q9Y577 477 aa16.36■□□□□ 0.21
PRKCSH-217ENST00000592741 DHRS12A0PJE2 317 aa16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 FAM234BA2RU67 622 aa16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 GAPDHSO14556 408 aaPredicted RBP16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 FFAR2O15552 330 aa16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 IGSF6O95976 241 aa16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 PSMC3P17980 439 aa16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 ITGB6P18564 788 aa16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 LAG3P18627 525 aa16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 ZFP36L2P47974 494 aaKnown RBP16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 POLE2P56282 527 aa16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 NFATC2Q13469 925 aa16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 GTF2H2Q13888 395 aa16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 CNPY1Q3B7I2 92 aa16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 TBCELQ5QJ74 424 aa16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 GTF2H2CQ6P1K8 395 aa16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 SLC39A5Q6ZMH5 540 aa16.35■□□□□ 0.21
PRKCSH-217ENST00000592741 METTL3Q86U44 580 aaKnown RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms