RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 A8MU76 341 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 PRAMEF1O95521 474 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 VIPP01282 170 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 LIPCP11150 499 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 BRAFP15056 766 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 XRCC1P18887 633 aaPredicted RBP13.65□□□□□ -0.22
APOC1-208ENST00000592535 IDSP22304 550 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 RPL10P27635 214 aaKnown RBP13.65□□□□□ -0.22
APOC1-208ENST00000592535 CSTF2P33240 577 aaKnown RBP eCLIP13.65□□□□□ -0.22
APOC1-208ENST00000592535 SLC19A1P41440 591 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 CTSCP53634 463 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 DRG2P55039 364 aaKnown RBP13.65□□□□□ -0.22
APOC1-208ENST00000592535 GDF10P55107 478 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 VAC14Q08AM6 782 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 SRSF6Q13247 344 aaKnown RBP13.65□□□□□ -0.22
APOC1-208ENST00000592535 SNAP47Q5SQN1 464 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 DENND5AQ6IQ26 1287 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 ABRAXAS1Q6UWZ7 409 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 ARHGEF18Q6ZSZ5 1173 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 KLHDC8BQ8IXV7 354 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 RNF10Q8N5U6 811 aaKnown RBP13.65□□□□□ -0.22
APOC1-208ENST00000592535 FAM71DQ8N9W8 422 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 AVL9Q8NBF6 648 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 AGBL5Q8NDL9 886 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 OR13C4Q8NGS5 318 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 SLC35B2Q8TB61 432 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 ZNF398Q8TD17 642 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 NCSTNQ92542 709 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 PPP1R2P1Q96PQ5 205 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 ZCCHC2Q9C0B9 1178 aaKnown RBP13.65□□□□□ -0.22
APOC1-208ENST00000592535 SMOXQ9NWM0 555 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 OCIAD1Q9NX40 245 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 PDP2Q9P2J9 529 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 GUCA1BQ9UMX6 200 aa13.65□□□□□ -0.22
APOC1-208ENST00000592535 BPTFQ12830 3046 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 OR2AG2A6NM03 316 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 OR52A4PA6NMU1 304 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 ZNF189O75820 626 aaPredicted RBP13.64□□□□□ -0.23
APOC1-208ENST00000592535 METTL18O95568 372 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 VCLP18206 1134 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 ARSDP51689 593 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 GSDMDP57764 484 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 TMPRSS15P98073 1019 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 PARP6Q2NL67 630 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 TMEM164Q5U3C3 297 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 AGAP9Q5VTM2 703 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 KCTD11Q693B1 232 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 TMEM220Q6QAJ8 160 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 WDR74Q6RFH5 385 aaPredicted RBP13.64□□□□□ -0.23
APOC1-208ENST00000592535 WASH2PQ6VEQ5 465 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 CCDC81Q6ZN84 652 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 TMEM26Q6ZUK4 368 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 TRIM48Q8IWZ4 208 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 SNRNP27Q8WVK2 155 aaKnown RBP13.64□□□□□ -0.23
APOC1-208ENST00000592535 ART4Q93070 314 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 TAAR9Q96RI9 348 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 CCNL2Q96S94 520 aaPredicted RBP13.64□□□□□ -0.23
APOC1-208ENST00000592535 TMEM121Q9BTD3 319 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 ASB8Q9H765 288 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 ARNT2Q9HBZ2 717 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 WASH6PQ9NQA3 447 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 OGFRQ9NZT2 677 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 KLHL3Q9UH77 587 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 WDR37Q9Y2I8 494 aa13.64□□□□□ -0.23
APOC1-208ENST00000592535 EFCAB7A8K855 629 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 K7ENP7 123 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 ATXN7O15265 892 aaPredicted RBP13.63□□□□□ -0.23
APOC1-208ENST00000592535 EFSO43281 561 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 POP7O75817 140 aaKnown RBP13.63□□□□□ -0.23
APOC1-208ENST00000592535 SRP72O76094 671 aaKnown RBP13.63□□□□□ -0.23
APOC1-208ENST00000592535 CRTAMO95727 393 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 MSH3P20585 1137 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 AKT1P31749 480 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 ZNF140P52738 457 aaPredicted RBP13.63□□□□□ -0.23
APOC1-208ENST00000592535 XIAPP98170 497 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 DMPKQ09013 629 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 CLCA4Q14CN2 919 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 INO80CQ6PI98 192 aaPredicted RBP13.63□□□□□ -0.23
APOC1-208ENST00000592535 PCSK4Q6UW60 755 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 FAM83HQ6ZRV2 1179 aaPredicted RBP13.63□□□□□ -0.23
APOC1-208ENST00000592535 MICALCLQ6ZW33 695 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 DET1Q7L5Y6 550 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 ARHGAP22Q7Z5H3 698 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 AMZ2Q86W34 360 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 FAM129CQ86XR2 697 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 DTX1Q86Y01 620 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 TAB3Q8N5C8 712 aaPredicted RBP13.63□□□□□ -0.23
APOC1-208ENST00000592535 BEND7Q8N7W2 519 aaPredicted RBP13.63□□□□□ -0.23
APOC1-208ENST00000592535 CCDC112Q8NEF3 446 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 NAT14Q8WUY8 206 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 ATG4AQ8WYN0 398 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 TSGA10Q9BZW7 698 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 B3GNT4Q9C0J1 378 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 EPB41L1Q9H4G0 881 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 UCK1Q9HA47 277 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 POT1Q9NUX5 634 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 SLC39A1Q9NY26 324 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 PCDHGA3Q9Y5H0 932 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 B3GALT1Q9Y5Z6 326 aa13.63□□□□□ -0.23
APOC1-208ENST00000592535 SLC30A1Q9Y6M5 507 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms