RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 PRAMEF33A0A0G2JMD5 474 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 LDB2O43679 373 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 SGTAO43765 313 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 PRAMEF10O60809 474 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 PRAMEF1O95521 474 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 FGF3P11487 239 aaPredicted RBP19.84■□□□□ 0.77
CIRBP-239ENST00000592467 EPHA4P54764 986 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 CCZ1BP86790 482 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 CCZ1P86791 482 aaPredicted RBP19.84■□□□□ 0.77
CIRBP-239ENST00000592467 DMPKQ09013 629 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 ITGA9Q13797 1035 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 MEI1Q5TIA1 1274 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 WDR74Q6RFH5 385 aaPredicted RBP19.84■□□□□ 0.77
CIRBP-239ENST00000592467 OR10G6Q8NH81 332 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 GDAP1Q8TB36 358 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 ZNF398Q8TD17 642 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 SNRNP27Q8WVK2 155 aaKnown RBP19.84■□□□□ 0.77
CIRBP-239ENST00000592467 USP7Q93009 1102 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 PMEPA1Q969W9 287 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 SH3KBP1Q96B97 665 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 CCDC97Q96F63 343 aaPredicted RBP19.84■□□□□ 0.77
CIRBP-239ENST00000592467 PPP1R2P1Q96PQ5 205 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 TBC1D10AQ9BXI6 508 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 CPNE5Q9HCH3 593 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 WDR37Q9Y2I8 494 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 AHCTF1Q8WYP5 2266 aa19.84■□□□□ 0.77
CIRBP-239ENST00000592467 LILRA5A6NI73 299 aa19.83■□□□□ 0.77
CIRBP-239ENST00000592467 C2orf81A6NN90 581 aa19.83■□□□□ 0.77
CIRBP-239ENST00000592467 GOLGA6L6A8MZA4 724 aa19.83■□□□□ 0.77
CIRBP-239ENST00000592467 EFSO43281 561 aa19.83■□□□□ 0.77
CIRBP-239ENST00000592467 LIASO43766 372 aa19.83■□□□□ 0.77
CIRBP-239ENST00000592467 KRT86O43790 486 aa19.83■□□□□ 0.77
CIRBP-239ENST00000592467 DUX1O43812 170 aa19.83■□□□□ 0.77
CIRBP-239ENST00000592467 SRP72O76094 671 aaKnown RBP19.83■□□□□ 0.77
CIRBP-239ENST00000592467 CLCA4Q14CN2 919 aa19.83■□□□□ 0.77
CIRBP-239ENST00000592467 FAM83HQ6ZRV2 1179 aaPredicted RBP19.83■□□□□ 0.77
CIRBP-239ENST00000592467 ARHGAP22Q7Z5H3 698 aa19.83■□□□□ 0.77
CIRBP-239ENST00000592467 SLC13A5Q86YT5 568 aaPredicted RBP19.83■□□□□ 0.77
CIRBP-239ENST00000592467 TRAPPC5Q8IUR0 188 aa19.83■□□□□ 0.77
CIRBP-239ENST00000592467 LRRC8AQ8IWT6 810 aa19.83■□□□□ 0.77
CIRBP-239ENST00000592467 BMPERQ8N8U9 685 aa19.83■□□□□ 0.77
CIRBP-239ENST00000592467 UBE2Q2Q8WVN8 375 aa19.83■□□□□ 0.77
CIRBP-239ENST00000592467 B3GNT4Q9C0J1 378 aa19.83■□□□□ 0.77
CIRBP-239ENST00000592467 FEZ2Q9UHY8 353 aaPredicted RBP19.83■□□□□ 0.77
CIRBP-239ENST00000592467 POP7O75817 140 aaKnown RBP19.82■□□□□ 0.76
CIRBP-239ENST00000592467 RPL10P27635 214 aaKnown RBP19.82■□□□□ 0.76
CIRBP-239ENST00000592467 MAPK10P53779 464 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 DRG2P55039 364 aaKnown RBP19.82■□□□□ 0.76
CIRBP-239ENST00000592467 TMPRSS3P57727 454 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 CXADRP78310 365 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 GTF2H3Q13889 308 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 SIX1Q15475 284 aaPredicted RBP19.82■□□□□ 0.76
CIRBP-239ENST00000592467 TGIF1Q15583 401 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 SEPT7Q16181 437 aaKnown RBP19.82■□□□□ 0.76
CIRBP-239ENST00000592467 TMEM220Q6QAJ8 160 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 PCSK4Q6UW60 755 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 ARHGEF18Q6ZSZ5 1173 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 TMEM26Q6ZUK4 368 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 GPR155Q7Z3F1 870 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 DTX1Q86Y01 620 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 JAMLQ86YT9 394 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 CCDC112Q8NEF3 446 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 NAT14Q8WUY8 206 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.82■□□□□ 0.76
CIRBP-239ENST00000592467 STN1Q9H668 368 aaKnown RBP19.82■□□□□ 0.76
CIRBP-239ENST00000592467 OCIAD1Q9NX40 245 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 DNMT3AQ9Y6K1 912 aaPredicted RBP19.82■□□□□ 0.76
CIRBP-239ENST00000592467 SLC30A1Q9Y6M5 507 aa19.82■□□□□ 0.76
CIRBP-239ENST00000592467 MN1Q10571 1320 aaPredicted RBP19.81■□□□□ 0.76
CIRBP-239ENST00000592467 OR2AG2A6NM03 316 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 OR52A4PA6NMU1 304 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 CCL22O00626 93 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 KCNJ13O60928 360 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 CRTAMO95727 393 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 AP2A1O95782 977 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 IDSP22304 550 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 PSMA3P25788 255 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 UCNP55089 124 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 BROXQ5VW32 411 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 AVL9Q8NBF6 648 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 AHCYL2Q96HN2 611 aaKnown RBP19.81■□□□□ 0.76
CIRBP-239ENST00000592467 ZCCHC2Q9C0B9 1178 aaKnown RBP19.81■□□□□ 0.76
CIRBP-239ENST00000592467 ASB8Q9H765 288 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 SLC40A1Q9NP59 571 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 POT1Q9NUX5 634 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 PCDHGA3Q9Y5H0 932 aa19.81■□□□□ 0.76
CIRBP-239ENST00000592467 PDZK1P1A8MUH7 402 aa19.8■□□□□ 0.76
CIRBP-239ENST00000592467 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.8■□□□□ 0.76
CIRBP-239ENST00000592467 H7C0S8 307 aa19.8■□□□□ 0.76
CIRBP-239ENST00000592467 PTMAP06454 111 aaKnown RBP19.8■□□□□ 0.76
CIRBP-239ENST00000592467 TPH1P17752 444 aa19.8■□□□□ 0.76
CIRBP-239ENST00000592467 TMPRSS15P98073 1019 aa19.8■□□□□ 0.76
CIRBP-239ENST00000592467 PDE1BQ01064 536 aa19.8■□□□□ 0.76
CIRBP-239ENST00000592467 SRSF6Q13247 344 aaKnown RBP19.8■□□□□ 0.76
CIRBP-239ENST00000592467 NFE2L1Q14494 772 aa19.8■□□□□ 0.76
CIRBP-239ENST00000592467 P3H1Q32P28 736 aa19.8■□□□□ 0.76
CIRBP-239ENST00000592467 SEL1L2Q5TEA6 688 aa19.8■□□□□ 0.76
CIRBP-239ENST00000592467 AMZ2Q86W34 360 aa19.8■□□□□ 0.76
CIRBP-239ENST00000592467 ZFAND4Q86XD8 727 aa19.8■□□□□ 0.76
CIRBP-239ENST00000592467 BEND7Q8N7W2 519 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms