RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 ASTE1Q2TB18 679 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-226ENST00000591534 MEI1Q5TIA1 1274 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 LRRC66Q68CR7 880 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 MARK2Q7KZI7 788 aaKnown RBP9.34□□□□□ -0.91
BRCA1-226ENST00000591534 SYT9Q86SS6 491 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 PLXDC1Q8IUK5 500 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 PHYKPLQ8IUZ5 450 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 PELI3Q8N2H9 469 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 C9orf43Q8TAL5 461 aaPredicted RBP9.34□□□□□ -0.91
BRCA1-226ENST00000591534 PIH1D2Q8WWB5 315 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 HTR3CQ8WXA8 447 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 NCSTNQ92542 709 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 BTBD6Q96KE9 485 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 CHP1Q99653 195 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 ISCUQ9H1K1 167 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 ABCG8Q9H221 673 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 SARS2Q9NP81 518 aaKnown RBP9.34□□□□□ -0.91
BRCA1-226ENST00000591534 NT5MQ9NPB1 228 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 RNF14Q9UBS8 474 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 IP6K2Q9UHH9 426 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 PILRAQ9UKJ1 303 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 TMEM98Q9Y2Y6 226 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.34□□□□□ -0.91
BRCA1-226ENST00000591534 JRKLQ9Y4A0 524 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 LRRK1Q38SD2 2015 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 AHCTF1Q8WYP5 2266 aa9.34□□□□□ -0.91
BRCA1-226ENST00000591534 SPTA1P02549 2419 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 MAST4O15021 2626 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 A0A0J9YYE9 177 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 CTAGE9A4FU28 777 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 A8MU76 341 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 GPR89AB7ZAQ6 455 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 MAP3K6O95382 1288 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 PEX11BO96011 259 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 TRBC1P01850 177 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 GPR89BP0CG08 455 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 EDN3P14138 238 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 WT1P19544 449 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-226ENST00000591534 MX2P20592 715 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 CASRP41180 1078 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 CETN2P41208 172 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 SSR1P43307 286 aaKnown RBP9.33□□□□□ -0.92
BRCA1-226ENST00000591534 HADHBP55084 474 aaKnown RBP9.33□□□□□ -0.92
BRCA1-226ENST00000591534 MAXP61244 160 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 PLAURQ03405 335 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 HYAL2Q12891 473 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 MAP7Q14244 749 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 SMTNL2Q2TAL5 461 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 ANKRD20A8PQ5CZ79 823 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 COLEC12Q5KU26 742 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 SNAP47Q5SQN1 464 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 LCE2AQ5TA79 106 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-226ENST00000591534 ANKS6Q68DC2 871 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 TXNRD3NBQ6F5E7 133 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 CHST15Q7LFX5 561 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-226ENST00000591534 TSPAN33Q86UF1 283 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 PTRH1Q86Y79 214 aaKnown RBP9.33□□□□□ -0.92
BRCA1-226ENST00000591534 MAP7D3Q8IWC1 876 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 TP53INP2Q8IXH6 220 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 PGBD5Q8N414 524 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 ESX1Q8N693 406 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 TEX26Q8N6G2 289 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 SLC37A2Q8TED4 501 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 PATE1Q8WXA2 126 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 NANOS1Q8WY41 292 aaKnown RBP9.33□□□□□ -0.92
BRCA1-226ENST00000591534 FATE1Q969F0 183 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 RTP4Q96DX8 246 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 ZNF830Q96NB3 372 aaPredicted RBP9.33□□□□□ -0.92
BRCA1-226ENST00000591534 ADGRE3Q9BY15 652 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 THAP2Q9H0W7 228 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 RAD18Q9NS91 495 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 OCIAD1Q9NX40 245 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 PKD2L2Q9NZM6 624 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 CD84Q9UIB8 345 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 NENFQ9UMX5 172 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 KCTD3Q9Y597 815 aa9.33□□□□□ -0.92
BRCA1-226ENST00000591534 TRBV23OR9-2A0A075B6M9 112 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 MIF4GDA9UHW6 222 aaKnown RBP9.32□□□□□ -0.92
BRCA1-226ENST00000591534 MYO1FO00160 1098 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 MATN3O15232 486 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 INPP4BO15327 924 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 TOX3O15405 576 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-226ENST00000591534 STK17BO94768 372 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 BMP4P12644 408 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 F3P13726 295 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 TCN2P20062 427 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 CCNCP24863 283 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 IL1R2P27930 398 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 CASQ1P31415 396 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 CSF2RBP32927 897 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 SLC1A1P43005 524 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 MAPK9P45984 424 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 STC1P52823 247 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 CDC20Q12834 499 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 NFATC2Q13469 925 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-226ENST00000591534 IYDQ6PHW0 289 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 TREML4Q6UXN2 200 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 RAD9BQ6WBX8 426 aa9.32□□□□□ -0.92
BRCA1-226ENST00000591534 ARHGAP22Q7Z5H3 698 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms