RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 GTF2H3Q13889 308 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 LRP8Q14114 963 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 NFE2L1Q14494 772 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 SEMA3AQ14563 771 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 TPSAB1Q15661 275 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 DBN1Q16643 649 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 INSCQ1MX18 579 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 AMZ1Q400G9 498 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 IYDQ6PHW0 289 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 UNQ6494/PRO21346Q6UXR6 183 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 SYT10Q6XYQ8 523 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 USP53Q70EK8 1073 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 SNX20Q7Z614 316 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 SPRED1Q7Z699 444 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 LDB1Q86U70 411 aaPredicted RBP11.34□□□□□ -0.59
VMP1-211ENST00000591315 CAND1Q86VP6 1230 aaKnown RBP11.34□□□□□ -0.59
VMP1-211ENST00000591315 CCNJLQ8IV13 435 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 AGGF1Q8N302 714 aaeCLIP11.34□□□□□ -0.59
VMP1-211ENST00000591315 GALNT15Q8N3T1 639 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 CLDN19Q8N6F1 224 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 DCBLD1Q8N8Z6 715 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 MDM1Q8TC05 714 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 NAT6Q93015 286 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 RANBP9Q96S59 729 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 FOXP3Q9BZS1 431 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 LRRN3Q9H3W5 708 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 EIF2B3Q9NR50 452 aaKnown RBP11.34□□□□□ -0.59
VMP1-211ENST00000591315 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.34□□□□□ -0.59
VMP1-211ENST00000591315 NCKIPSDQ9NZQ3 722 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 MARCH4Q9P2E8 410 aaPredicted RBP11.34□□□□□ -0.59
VMP1-211ENST00000591315 ZNF624Q9P2J8 865 aaPredicted RBP11.34□□□□□ -0.59
VMP1-211ENST00000591315 PRSS21Q9Y6M0 314 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 SLC30A1Q9Y6M5 507 aa11.34□□□□□ -0.59
VMP1-211ENST00000591315 PKD1L2Q7Z442 2459 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 AHCTF1Q8WYP5 2266 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 HEATR9A2RTY3 570 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 OR52A4PA6NMU1 304 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 H7C0S8 307 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 NTN3O00634 580 aaPredicted RBP11.33□□□□□ -0.6
VMP1-211ENST00000591315 GOT2P00505 430 aaKnown RBP11.33□□□□□ -0.6
VMP1-211ENST00000591315 CAPNS1P04632 268 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 F7P08709 466 aaPredicted RBP11.33□□□□□ -0.6
VMP1-211ENST00000591315 ALDH4A1P30038 563 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 HADHAP40939 763 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 MAGEA6P43360 314 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 FNTAP49354 379 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 PDE1BQ01064 536 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 CFHR1Q03591 330 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 CLCA4Q14CN2 919 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 LRRC8BQ6P9F7 803 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 C4orf22Q6V702 233 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 ZNF438Q7Z4V0 828 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 SFRP1Q8N474 314 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 ATXN7L3BQ96GX2 97 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 PWWP2AQ96N64 755 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 TTC25Q96NG3 672 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 TIMM29Q9BSF4 260 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 TRIM51Q9BSJ1 452 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 RDH14Q9HBH5 336 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 EVA1BQ9NVM1 165 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 ZDHHC3Q9NYG2 299 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 PSMD13Q9UNM6 376 aa11.33□□□□□ -0.6
VMP1-211ENST00000591315 IGLV3-16A0A075B6K0 115 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 GOLGA6L10A0A0M3HER8 536 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 RHPN2P1A8MT19 583 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 PDZK1P1A8MUH7 402 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 GPR89AB7ZAQ6 455 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 TAF4O00268 1085 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 NUDT21O43809 227 aaKnown RBP11.32□□□□□ -0.6
VMP1-211ENST00000591315 OR1I1O60431 355 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 BANF1O75531 89 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 POLBP06746 335 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 GPR89BP0CG08 455 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 CDK4P11802 303 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 F3P13726 295 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 HOXB3P14651 431 aaPredicted RBP11.32□□□□□ -0.6
VMP1-211ENST00000591315 MPSTP25325 297 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 ACRV1P26436 265 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 ARNTP27540 789 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 CD1CP29017 333 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 SLC19A1P41440 591 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 NPY2RP49146 381 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 CLCNKAP51800 687 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 ETF1P62495 437 aaKnown RBP11.32□□□□□ -0.6
VMP1-211ENST00000591315 ACVR1Q04771 509 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 CACNG1Q06432 222 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 CYP4F3Q08477 520 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 PPP1R7Q15435 360 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 SKIDA1Q1XH10 827 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 ISXQ2M1V0 245 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 GPR33Q49SQ1 333 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 PCID2Q5JVF3 399 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.32□□□□□ -0.6
VMP1-211ENST00000591315 NAPRTQ6XQN6 538 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 ZNF574Q6ZN55 896 aaPredicted RBP11.32□□□□□ -0.6
VMP1-211ENST00000591315 AMZ2Q86W34 360 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 SPNS2Q8IVW8 549 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 HOMEZQ8IX15 550 aa11.32□□□□□ -0.6
VMP1-211ENST00000591315 PPHLN1Q8NEY8 458 aaKnown RBP11.32□□□□□ -0.6
VMP1-211ENST00000591315 OR6P1Q8NGX9 317 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms