RNA–Protein interactions for RNA: ENST00000589686.5

CIRBP-224, Transcript of cold inducible RNA binding protein, human

TSL 2

Gene CIRBP, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-224	ENST00000589686	AMZ2	Q86W34	360 aa		20.69	■□□□□ 0.9
CIRBP-224	ENST00000589686	ZNF761	Q86XN6	746 aa	Predicted RBP	20.69	■□□□□ 0.9
CIRBP-224	ENST00000589686	TAB3	Q8N5C8	712 aa	Predicted RBP	20.69	■□□□□ 0.9
CIRBP-224	ENST00000589686	WASH6P	Q9NQA3	447 aa		20.69	■□□□□ 0.9
CIRBP-224	ENST00000589686	ZKSCAN5	Q9Y2L8	839 aa		20.69	■□□□□ 0.9
CIRBP-224	ENST00000589686	ITPR1	Q14643	2758 aa		20.69	■□□□□ 0.9
CIRBP-224	ENST00000589686	IGHV5-10-1	A0A0J9YXX1	117 aa		20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	AGAP14	A8MT82	685 aa		20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	DUX1	O43812	170 aa		20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	POP7	O75817	140 aa	Known RBP	20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	HOXB3	P14651	431 aa	Predicted RBP	20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	TPH1	P17752	444 aa		20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	PPM1F	P49593	454 aa	Predicted RBP	20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	LIMK2	P53671	638 aa		20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	EPHA4	P54764	986 aa		20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	UBE2I	P63279	158 aa	Known RBP	20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	TMPRSS15	P98073	1019 aa		20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	TRA2A	Q13595	282 aa	Known RBP eCLIP	20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	SIX1	Q15475	284 aa	Predicted RBP	20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	DRICH1	Q6PGQ1	229 aa	Predicted RBP	20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	TMEM220	Q6QAJ8	160 aa		20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	CCDC89	Q8N998	374 aa		20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	ULK4	Q96C45	1275 aa		20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	CCDC97	Q96F63	343 aa	Predicted RBP	20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	ETNK1	Q9HBU6	452 aa		20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	SCHIP1	Q9P0W5	487 aa	Predicted RBP	20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	CRLS1	Q9UJA2	301 aa		20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	ZNF106	Q9H2Y7	1883 aa	Known RBP	20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	ADAMTS20	P59510	1910 aa		20.68	■□□□□ 0.9
CIRBP-224	ENST00000589686	OR2AG2	A6NM03	316 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	HGS	O14964	777 aa	Predicted RBP	20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	VIP	P01282	170 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	FGG	P02679	453 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	HGF	P14210	728 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	ITGAL	P20701	1170 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	ITPKB	P27987	946 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	CSF2RB	P32927	897 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	CTSC	P53634	463 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	CFHR1	Q03591	330 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	DMPK	Q09013	629 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	SEPT6	Q14141	434 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	SEPT7	Q16181	437 aa	Known RBP	20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	GPR33	Q49SQ1	333 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	TMEM71	Q6P5X7	295 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	SNX20	Q7Z614	316 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	TRIM48	Q8IWZ4	208 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	DCUN1D1	Q96GG9	259 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	CCDC74B	Q96LY2	380 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	DPH1	Q9BZG8	443 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	ZMYND15	Q9H091	742 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	EPB41L1	Q9H4G0	881 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	UCK1	Q9HA47	277 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	PAK5	Q9P286	719 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	PISD	Q9UG56	409 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	DRG1	Q9Y295	367 aa	Known RBP	20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	PCDHGA7	Q9Y5G6	932 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	SLC30A1	Q9Y6M5	507 aa		20.67	■□□□□ 0.9
CIRBP-224	ENST00000589686	LAMA5	O15230	3695 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	KLHL33	A6NCF5	533 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	LILRA5	A6NI73	299 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686		E7EVH7	732 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	CEP104	O60308	925 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	GAS8	O95995	478 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	RALB	P11234	206 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	RPL10	P27635	214 aa	Known RBP	20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	SLC19A1	P41440	591 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	LMAN1	P49257	510 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	CDH17	Q12864	832 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	POU6F1	Q14863	301 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	C16orf72	Q14CZ0	275 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	FNBP1L	Q5T0N5	605 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	WDR74	Q6RFH5	385 aa	Predicted RBP	20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	SPACA3	Q8IXA5	215 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	DNAAF3	Q8N9W5	541 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	STYX	Q8WUJ0	223 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	HEXDC	Q8WVB3	486 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	KCNE4	Q8WWG9	221 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	SGF29	Q96ES7	293 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	NAF1	Q96HR8	494 aa	Known RBP	20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	DNAJC1	Q96KC8	554 aa	Known RBP	20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	NLE1	Q9NVX2	485 aa	Predicted RBP	20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	PIH1D1	Q9NWS0	290 aa	Known RBP	20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	ZNF624	Q9P2J8	865 aa	Predicted RBP	20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	FAM208B	Q5VWN6	2430 aa		20.66	■□□□□ 0.9
CIRBP-224	ENST00000589686	NBEA	Q8NFP9	2946 aa		20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686		H7C0S8	307 aa		20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686	SUN1	O94901	812 aa		20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686	THRA	P10827	490 aa		20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686	ETS1	P14921	441 aa		20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686	BRAF	P15056	766 aa		20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686	SLC5A2	P31639	672 aa		20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686	MC4R	P32245	332 aa		20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686	HAL	P42357	657 aa		20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686	DRG2	P55039	364 aa	Known RBP	20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686	SEMA5A	Q13591	1074 aa		20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686	C4orf22	Q6V702	233 aa		20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686	DET1	Q7L5Y6	550 aa		20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686	JAML	Q86YT9	394 aa		20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686	RBM12B	Q8IXT5	1001 aa	Known RBP	20.65	■□□□□ 0.9
CIRBP-224	ENST00000589686	NXPE1	Q8N323	547 aa		20.65	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms