RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	PTS	Q03393	145 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	TBL3	Q12788	808 aa	Known RBP	15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	RUNX3	Q13761	415 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	ARSI	Q5FYB1	569 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	TECRL	Q5HYJ1	363 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	LRRC73	Q5JTD7	316 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	CTSL3P	Q5NE16	218 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	FAM151B	Q6UXP7	276 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	RBM44	Q6ZP01	1051 aa	Known RBP	15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	TMEM126B	Q8IUX1	230 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	CBARP	Q8N350	705 aa	Predicted RBP	15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	SLC35B4	Q969S0	331 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	CCDC97	Q96F63	343 aa	Predicted RBP	15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	SCYL1	Q96KG9	808 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	TSNARE1	Q96NA8	513 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	KXD1	Q9BQD3	176 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	SIKE1	Q9BRV8	207 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	MRPL46	Q9H2W6	279 aa	Known RBP	15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	POPDC3	Q9HBV1	291 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	TMEM165	Q9HC07	324 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	OXSM	Q9NWU1	459 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	B4GALT6	Q9UBX8	382 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	SLC7A8	Q9UHI5	535 aa		15.25	■□□□□ 0.03
DDX39A-209	ENST00000589318	TRBV5-4	A0A0C4DH59	114 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318		E9PBE3	544 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	LYPLA1	O75608	230 aa	Predicted RBP	15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	PRAMEF1	O95521	474 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	ZNF37A	P17032	561 aa	Predicted RBP	15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	GRK2	P25098	689 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	FMO4	P31512	558 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	GJA4	P35212	333 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	EMP3	P54852	163 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	EIF4H	Q15056	248 aa	Known RBP	15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	FAM83E	Q2M2I3	478 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	AARS2	Q5JTZ9	985 aa	Known RBP	15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	CES5A	Q6NT32	575 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	BRAT1	Q6PJG6	821 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	CCDC80	Q76M96	950 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	TERB1	Q8NA31	727 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	RBM15B	Q8NDT2	890 aa	Known RBP	15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	GPR26	Q8NDV2	337 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	TRPC4AP	Q8TEL6	797 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	ELSPBP1	Q96BH3	223 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	SORT1	Q99523	831 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	MRPL57	Q9BQC6	102 aa	Known RBP	15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	RPP25	Q9BUL9	199 aa	Known RBP	15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	RBM38	Q9H0Z9	239 aa	Known RBP	15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	P2RY12	Q9H244	342 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	POMK	Q9H5K3	350 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	IL36A	Q9UHA7	158 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	ZNHIT2	Q9UHR6	403 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	MID2	Q9UJV3	735 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	SLC8A2	Q9UPR5	921 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	VPS9D1	Q9Y2B5	631 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	TMED5	Q9Y3A6	229 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	SLC30A1	Q9Y6M5	507 aa		15.24	■□□□□ 0.03
DDX39A-209	ENST00000589318	ANTXRL	A6NF34	631 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	DLX3	O60479	287 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	CCNT2	O60583	730 aa	Known RBP	15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	TRIM13	O60858	407 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	TNFAIP8	O95379	198 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	C1S	P09871	688 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	SMIM18	P0DKX4	95 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	MYL2	P10916	166 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	PSMC3	P17980	439 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	SLC1A6	P48664	564 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	NFATC2	Q13469	925 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	PDCD4	Q53EL6	469 aa	Known RBP	15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	RFLNA	Q6ZTI6	216 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	SNX20	Q7Z614	316 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	CPA6	Q8N4T0	437 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	KDM1B	Q8NB78	822 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	CATSPER1	Q8NEC5	780 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	PPP1R14C	Q8TAE6	165 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	ABTB1	Q969K4	478 aa	Predicted RBP	15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	VPS50	Q96JG6	964 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	MSLNL	Q96KJ4	702 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	ZNF696	Q9H7X3	374 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	GALP	Q9UBC7	116 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	HCN2	Q9UL51	889 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	PPM1H	Q9ULR3	514 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	RAB26	Q9ULW5	256 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	PLXNA2	O75051	1894 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	C15orf38-AP3S2	A0A0A6YYH1	394 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	AGAP14	A8MT82	685 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	ARNTL	O00327	626 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	PKM	P14618	531 aa	Known RBP	15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	TIMP2	P16035	220 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	SPAM1	P38567	509 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	PTGER3	P43115	390 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	POLR2L	P62875	67 aa	Known RBP	15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	CREB5	Q02930	508 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	HSF5	Q4G112	596 aa	Predicted RBP	15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	AGAP9	Q5VTM2	703 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	CERS6	Q6ZMG9	384 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	TAS2R42	Q7RTR8	314 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	ARPIN	Q7Z6K5	226 aa		15.23	■□□□□ 0.03
DDX39A-209	ENST00000589318	SLC30A3	Q99726	388 aa		15.23	■□□□□ 0.03

Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms