RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 PRF1P14222 555 aa14.79□□□□□ -0.04
SF3A2-204ENST00000589118 ARCN1P48444 511 aaKnown RBP14.79□□□□□ -0.04
SF3A2-204ENST00000589118 E4F1Q66K89 784 aaPredicted RBP14.79□□□□□ -0.04
SF3A2-204ENST00000589118 ABRAXAS1Q6UWZ7 409 aa14.79□□□□□ -0.04
SF3A2-204ENST00000589118 ZNF571Q7Z3V5 609 aaPredicted RBP14.79□□□□□ -0.04
SF3A2-204ENST00000589118 SYVN1Q86TM6 617 aa14.79□□□□□ -0.04
SF3A2-204ENST00000589118 ADAMTS17Q8TE56 1095 aa14.79□□□□□ -0.04
SF3A2-204ENST00000589118 CXorf40BQ96DE9 158 aa14.79□□□□□ -0.04
SF3A2-204ENST00000589118 ZDHHC12Q96GR4 267 aa14.79□□□□□ -0.04
SF3A2-204ENST00000589118 SLC41A2Q96JW4 573 aa14.79□□□□□ -0.04
SF3A2-204ENST00000589118 GPR87Q9BY21 358 aa14.79□□□□□ -0.04
SF3A2-204ENST00000589118 HAUS4Q9H6D7 363 aa14.79□□□□□ -0.04
SF3A2-204ENST00000589118 ZNF451Q9Y4E5 1061 aa14.79□□□□□ -0.04
SF3A2-204ENST00000589118 LGALS16A8MUM7 142 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 ANKRD66B4E2M5 251 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 DDX3XO00571 662 aaKnown RBP eCLIP14.78□□□□□ -0.042e-16■■□□□ 14.1
SF3A2-204ENST00000589118 MATN3O15232 486 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 CEACAM4O75871 244 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 TMEM63AO94886 807 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 CA5AP35218 305 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 CD86P42081 329 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 ZNF165P49910 485 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 ZNF569Q5MCW4 686 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 CCDC183Q5T5S1 534 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 C11orf96Q7Z7L8 435 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 LRRTM4Q86VH4 590 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 TICAM1Q8IUC6 712 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 ENDOVQ8N8Q3 282 aaKnown RBP14.78□□□□□ -0.04
SF3A2-204ENST00000589118 CCHCR1Q8TD31 782 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 MAML1Q92585 1016 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 GLYATL1Q969I3 302 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 LYSMD1Q96S90 227 aa14.78□□□□□ -0.04
SF3A2-204ENST00000589118 LIMA1Q9UHB6 759 aaKnown RBP14.78□□□□□ -0.04
SF3A2-204ENST00000589118 LRRC53A6NM62 1247 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 KMOO15229 486 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 DPM1O60762 260 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 SCRG1O75711 98 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 SKILP12757 684 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 IDSP22304 550 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 PCK1P35558 622 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 GJC1P36383 396 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 ZNF135P52742 658 aaPredicted RBP14.77□□□□□ -0.05
SF3A2-204ENST00000589118 GALNT2Q10471 571 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 KRT81Q14533 505 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 BOLA3Q53S33 107 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 NCBP2-AS2Q69YL0 99 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 ALG1LQ6GMV1 187 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 FAM83HQ6ZRV2 1179 aaPredicted RBP14.77□□□□□ -0.05
SF3A2-204ENST00000589118 APTXQ7Z2E3 356 aaKnown RBP14.77□□□□□ -0.05
SF3A2-204ENST00000589118 TMEM126BQ8IUX1 230 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 TMEM151BQ8IW70 566 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 ZBTB2Q8N680 514 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 AVL9Q8NBF6 648 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 NAT14Q8WUY8 206 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 ZNF514Q96K75 400 aaPredicted RBP14.77□□□□□ -0.05
SF3A2-204ENST00000589118 PHF12Q96QT6 1004 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 ERGIC2Q96RQ1 377 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 CEP41Q9BYV8 373 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 BPIFA1Q9NP55 256 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 POT1Q9NUX5 634 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 EPHA6Q9UF33 1036 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 NTNG1Q9Y2I2 539 aa14.77□□□□□ -0.05
SF3A2-204ENST00000589118 CFAP20Q9Y6A4 193 aaKnown RBP14.77□□□□□ -0.05
SF3A2-204ENST00000589118 AURKAO14965 403 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 CDK14O94921 469 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 JCHAINP01591 159 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 ATP1A3P13637 1013 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 LPOP22079 712 aaPredicted RBP14.76□□□□□ -0.05
SF3A2-204ENST00000589118 SERPINB6P35237 376 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 ARL4DP49703 201 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 SLC25A11Q02978 314 aaKnown RBP14.76□□□□□ -0.05
SF3A2-204ENST00000589118 SLC10A2Q12908 348 aaPredicted RBP14.76□□□□□ -0.05
SF3A2-204ENST00000589118 KYNUQ16719 465 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 PLEKHS1Q5SXH7 462 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 DUS1LQ6P1R4 473 aaKnown RBP14.76□□□□□ -0.05
SF3A2-204ENST00000589118 B4GALNT4Q76KP1 1039 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 RHOT1Q8IXI2 618 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 PIAS4Q8N2W9 510 aaPredicted RBP14.76□□□□□ -0.05
SF3A2-204ENST00000589118 PNPLA2Q96AD5 504 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 ZNF501Q96CX3 271 aaPredicted RBP14.76□□□□□ -0.05
SF3A2-204ENST00000589118 C5orf34Q96MH7 638 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 NRTNQ99748 197 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 NUP85Q9BW27 656 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 SLC29A3Q9BZD2 475 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 ZFYVE1Q9HBF4 777 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 WASH6PQ9NQA3 447 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 ANO10Q9NW15 660 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 SEMA5BQ9P283 1151 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 SNX7Q9UNH6 387 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 SLC5A6Q9Y289 635 aa14.76□□□□□ -0.05
SF3A2-204ENST00000589118 ARHGAP10A1A4S6 786 aa14.75□□□□□ -0.05
SF3A2-204ENST00000589118 KCNK1O00180 336 aa14.75□□□□□ -0.05
SF3A2-204ENST00000589118 GPR39O43194 453 aa14.75□□□□□ -0.05
SF3A2-204ENST00000589118 CAPN1P07384 714 aa14.75□□□□□ -0.05
SF3A2-204ENST00000589118 BPIP17213 487 aa14.75□□□□□ -0.05
SF3A2-204ENST00000589118 FECHP22830 423 aa14.75□□□□□ -0.05
SF3A2-204ENST00000589118 SSR1P43307 286 aaKnown RBP14.75□□□□□ -0.05
SF3A2-204ENST00000589118 FOXL2P58012 376 aa14.75□□□□□ -0.05
SF3A2-204ENST00000589118 PDE1BQ01064 536 aa14.75□□□□□ -0.05
SF3A2-204ENST00000589118 ACY1Q03154 408 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms