RNA–Protein interactions for RNA: ENST00000588713.1

LIG3-211, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-211ENST00000588713 H0YCG3 227 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 GOLGA8RI6L899 631 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 PLD2O14939 933 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 MCF2LO15068 1137 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 GRID2O43424 1007 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 KCNAB3O43448 404 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ITM2AO43736 263 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 FBXO21O94952 628 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 BMP10O95393 424 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 SEMA4FO95754 770 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 C1QAP02745 245 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 SERPINE1P05121 402 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 FURINP09958 794 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ZSCAN5DPP0CG00 497 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ZNF12P17014 697 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 GARTP22102 1010 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 MMP8P22894 467 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 TBXAS1P24557 533 aaPredicted RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 GRK2P25098 689 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ADSLP30566 484 aaPredicted RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 GNA15P30679 374 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ACSL1P33121 698 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 TTKP33981 857 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 CRHR1P34998 444 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 EIF2DP41214 584 aaKnown RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 GABRB2P47870 512 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 LEPRP48357 1165 aaKnown RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 NUMBP49757 651 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ZNF132P52740 706 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 BCAT1P54687 386 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ALDH18A1P54886 795 aaKnown RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 PSMC5P62195 406 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 RACK1P63244 317 aaKnown RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 CLDN10P78369 228 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 COG7P83436 770 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 TXNL4AP83876 142 aaKnown RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 PLOD1Q02809 727 aaPredicted RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 SLC25A11Q02978 314 aaKnown RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 MBTD1Q05BQ5 628 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 CYP24A1Q07973 514 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 PPIDQ08752 370 aaKnown RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 GPR17Q13304 367 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 DMP1Q13316 513 aaPredicted RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 MPP3Q13368 585 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 MAMLD1Q13495 774 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 TRPC3Q13507 836 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 SEPT6Q14141 434 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ESPL1Q14674 2120 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 BCL2A1Q16548 175 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 BBS9Q3SYG4 887 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 XKR3Q5GH77 459 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 MDH1BQ5I0G3 518 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 FNBP1LQ5T0N5 605 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 FAXCQ5TGI0 409 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ANKRD22Q5VYY1 191 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 BTBD8Q5XKL5 378 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 TMEM198Q66K66 360 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 MBLAC2Q68D91 279 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 PDPK2PQ6A1A2 396 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 GRAMD4Q6IC98 578 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 TMEM214Q6NUQ4 689 aaKnown RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 LRRC8BQ6P9F7 803 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 KLHL35Q6PF15 583 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 MFSD7Q6UXD7 560 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 C4orf22Q6V702 233 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 BNC2Q6ZN30 1099 aaPredicted RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 TIFABQ6ZNK6 161 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ASB18Q6ZVZ8 466 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 TMEM110Q86TL2 294 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 CARM1Q86X55 608 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ZNF354CQ86Y25 554 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 HOMEZQ8IX15 550 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ADGRG2Q8IZP9 1017 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 GPD1LQ8N335 351 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 PHTF2Q8N3S3 785 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 FBXO39Q8N4B4 442 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 UBR7Q8N806 425 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ZFP28Q8NHY6 868 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ZNF420Q8TAQ5 688 aaPredicted RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 TAS1R2Q8TE23 839 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 PPP4R1Q8TF05 950 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 FNIP1Q8TF40 1166 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 KCNN1Q92952 543 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ABTB1Q969K4 478 aaPredicted RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 RTP4Q96DX8 246 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 COX4I2Q96KJ9 171 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 CNDP1Q96KN2 507 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 RILPQ96NA2 401 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 PPP1R10Q96QC0 940 aaKnown RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 RIT2Q99578 217 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 CCT7Q99832 543 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 FAM118BQ9BPY3 351 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 OSBPL11Q9BXB4 747 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 SLC29A3Q9BZD2 475 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 NUF2Q9BZD4 464 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ZNF518BQ9C0D4 1074 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 UNC45AQ9H3U1 944 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 RPF1Q9H9Y2 349 aaKnown RBP4.14□□□□□ -1.75
LIG3-211ENST00000588713 MRGBPQ9NV56 204 aa4.14□□□□□ -1.75
LIG3-211ENST00000588713 ARHGEF38Q9NXL2 777 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms