RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 POT1Q9NUX5 634 aa14.22□□□□□ -0.13
DDX39A-208ENST00000588692 DNAJC16Q9Y2G8 782 aa14.22□□□□□ -0.13
DDX39A-208ENST00000588692 DNMT3AQ9Y6K1 912 aaPredicted RBP14.22□□□□□ -0.13
DDX39A-208ENST00000588692 PRAMEF33A0A0G2JMD5 474 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 UGT1A9O60656 530 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 PRAMEF10O60809 474 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 VIPP01282 170 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 UGT1A6P19224 532 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 UGT1A1P22309 533 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 UGT1A4P22310 534 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 CSTF2P33240 577 aaKnown RBP eCLIP14.21□□□□□ -0.13
DDX39A-208ENST00000588692 UGT1A3P35503 534 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 HADHAP40939 763 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 ETV5P41161 510 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 MAPK10P53779 464 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 DMPKQ09013 629 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 LONRF2Q1L5Z9 754 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 SOWAHCQ53LP3 525 aaPredicted RBP14.21□□□□□ -0.13
DDX39A-208ENST00000588692 TRIM48Q8IWZ4 208 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 RBM12BQ8IXT5 1001 aaKnown RBP14.21□□□□□ -0.13
DDX39A-208ENST00000588692 RASGEF1AQ8N9B8 481 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 OR4K2Q8NGD2 314 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 ZNF398Q8TD17 642 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 USP7Q93009 1102 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 LRRC40Q9H9A6 602 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 UGT1A7Q9HAW7 530 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 UGT1A10Q9HAW8 530 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 UGT1A8Q9HAW9 530 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 GUCA1BQ9UMX6 200 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 PCDHGA3Q9Y5H0 932 aa14.21□□□□□ -0.13
DDX39A-208ENST00000588692 AHCTF1Q8WYP5 2266 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 KLHL33A6NCF5 533 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 GPR39O43194 453 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 PSMD3O43242 534 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 SRP72O76094 671 aaKnown RBP14.2□□□□□ -0.14
DDX39A-208ENST00000588692 MSH3P20585 1137 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 AKT1P31749 480 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 HALP42357 657 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 VAC14Q08AM6 782 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 MSLNQ13421 630 aaPredicted RBP14.2□□□□□ -0.14
DDX39A-208ENST00000588692 OLIG2Q13516 323 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 SEPT7Q16181 437 aaKnown RBP14.2□□□□□ -0.14
DDX39A-208ENST00000588692 KCTD11Q693B1 232 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 DENND5AQ6IQ26 1287 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 TMEM26Q6ZUK4 368 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 AMZ2Q86W34 360 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 LSM14AQ8ND56 463 aaKnown RBP14.2□□□□□ -0.14
DDX39A-208ENST00000588692 ULK4Q96C45 1275 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 RTP4Q96DX8 246 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 TAAR9Q96RI9 348 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 TMEM121Q9BTD3 319 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 CPNE5Q9HCH3 593 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 TMEM9Q9P0T7 183 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 SCHIP1Q9P0W5 487 aaPredicted RBP14.2□□□□□ -0.14
DDX39A-208ENST00000588692 ZNF624Q9P2J8 865 aaPredicted RBP14.2□□□□□ -0.14
DDX39A-208ENST00000588692 FKBPLQ9UIM3 349 aa14.2□□□□□ -0.14
DDX39A-208ENST00000588692 R3HDM2Q9Y2K5 976 aaKnown RBP14.2□□□□□ -0.14
DDX39A-208ENST00000588692 MN1Q10571 1320 aaPredicted RBP14.2□□□□□ -0.14
DDX39A-208ENST00000588692 TCRBV7S2A1N4TA0A589 114 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 AGAP14A8MT82 685 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 B4E171 279 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 C9orf172C9J069 976 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.19□□□□□ -0.14
DDX39A-208ENST00000588692 AGRPO00253 132 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 CCDC175P0C221 793 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 FGF3P11487 239 aaPredicted RBP14.19□□□□□ -0.14
DDX39A-208ENST00000588692 CCL4P13236 92 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 BRAFP15056 766 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 STIP1P31948 543 aaKnown RBP14.19□□□□□ -0.14
DDX39A-208ENST00000588692 SLC19A1P41440 591 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 TSPAN7P41732 249 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 MAPK9P45984 424 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 ZNF140P52738 457 aaPredicted RBP14.19□□□□□ -0.14
DDX39A-208ENST00000588692 CTSCP53634 463 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 RAB15P59190 212 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 PTPRCAPQ14761 206 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 TMEM220Q6QAJ8 160 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 CCDC81Q6ZN84 652 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 ZNF662Q6ZS27 426 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 ARHGAP22Q7Z5H3 698 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 PLXDC1Q8IUK5 500 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 NCSTNQ92542 709 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 CXorf40BQ96DE9 158 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 ALS2CR12Q96Q35 445 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 CCNL2Q96S94 520 aaPredicted RBP14.19□□□□□ -0.14
DDX39A-208ENST00000588692 DDA1Q9BW61 102 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 ASPSCR1Q9BZE9 553 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 ASB8Q9H765 288 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 FOXJ2Q9P0K8 574 aa14.19□□□□□ -0.14
DDX39A-208ENST00000588692 OR2AG2A6NM03 316 aa14.18□□□□□ -0.14
DDX39A-208ENST00000588692 ERI2A8K979 691 aaKnown RBP14.18□□□□□ -0.14
DDX39A-208ENST00000588692 K7ENP7 123 aa14.18□□□□□ -0.14
DDX39A-208ENST00000588692 TK2O00142 265 aa14.18□□□□□ -0.14
DDX39A-208ENST00000588692 ATXN7O15265 892 aaPredicted RBP14.18□□□□□ -0.14
DDX39A-208ENST00000588692 POP7O75817 140 aaKnown RBP14.18□□□□□ -0.14
DDX39A-208ENST00000588692 METTL18O95568 372 aa14.18□□□□□ -0.14
DDX39A-208ENST00000588692 AP2A1O95782 977 aa14.18□□□□□ -0.14
DDX39A-208ENST00000588692 RALBP11234 206 aa14.18□□□□□ -0.14
DDX39A-208ENST00000588692 ITGALP20701 1170 aa14.18□□□□□ -0.14
DDX39A-208ENST00000588692 MPSTP25325 297 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms