RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 SDR42E2A6NKP2 422 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 KIF2AO00139 706 aaPredicted RBP19.88■□□□□ 0.77
DDX39A-207ENST00000588542 CASC3O15234 703 aaKnown RBP19.88■□□□□ 0.77
DDX39A-207ENST00000588542 TP73O15350 636 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 RAD51CO43502 376 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 POP7O75817 140 aaKnown RBP19.88■□□□□ 0.77
DDX39A-207ENST00000588542 CDK4P11802 303 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 ATP1B2P14415 290 aaPredicted RBP19.88■□□□□ 0.77
DDX39A-207ENST00000588542 ARNTP27540 789 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 CLDN6P56747 220 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 SEMA3AQ14563 771 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 SMAD1Q15797 465 aaKnown RBP19.88■□□□□ 0.77
DDX39A-207ENST00000588542 BCL7AQ4VC05 210 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 HIBCHQ6NVY1 386 aaPredicted RBP19.88■□□□□ 0.77
DDX39A-207ENST00000588542 XKR5Q6UX68 686 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 ARL14Q8N4G2 192 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 NAT6Q93015 286 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 CCDC74AQ96AQ1 378 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 DCUN1D1Q96GG9 259 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 DNAJC16Q9Y2G8 782 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 RNF215Q9Y6U7 377 aa19.88■□□□□ 0.77
DDX39A-207ENST00000588542 CEP295Q9C0D2 2601 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 FAM187AA6NFU0 413 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 OPA1O60313 960 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 SNX2O60749 519 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 SEC31AO94979 1220 aaKnown RBP19.87■□□□□ 0.77
DDX39A-207ENST00000588542 RALBP11234 206 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 GLB1P16278 677 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 SPINK2P20155 84 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 E2F1Q01094 437 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 INSM1Q01101 510 aaPredicted RBP19.87■□□□□ 0.77
DDX39A-207ENST00000588542 DMPKQ09013 629 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 ITIH4Q14624 930 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 MORF4L2Q15014 288 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 IYDQ6PHW0 289 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 FAM83HQ6ZRV2 1179 aaPredicted RBP19.87■□□□□ 0.77
DDX39A-207ENST00000588542 AMZ2Q86W34 360 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 SFRP1Q8N474 314 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 OR6C4Q8NGE1 309 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 SLC37A2Q8TED4 501 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 SNF8Q96H20 258 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 LINC00615Q96LM1 132 aaPredicted RBP19.87■□□□□ 0.77
DDX39A-207ENST00000588542 FCRL3Q96P31 734 aaPredicted RBP19.87■□□□□ 0.77
DDX39A-207ENST00000588542 TRIM31Q9BZY9 425 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 OSGEPL1Q9H4B0 414 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 PRDM8Q9NQV8 689 aa19.87■□□□□ 0.77
DDX39A-207ENST00000588542 MARCH4Q9P2E8 410 aaPredicted RBP19.87■□□□□ 0.77
DDX39A-207ENST00000588542 TRBV23OR9-2A0A075B6M9 112 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 FAM237BA0A1B0GVD1 139 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 MAGEB16A2A368 324 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 EFCAB8A8MWE9 144 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 CFAP99D6REC4 459 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 NUDT21O43809 227 aaKnown RBP19.86■□□□□ 0.77
DDX39A-207ENST00000588542 KCNJ13O60928 360 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 F3P13726 295 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 RPL21P46778 160 aaKnown RBP19.86■□□□□ 0.77
DDX39A-207ENST00000588542 ARCN1P48444 511 aaKnown RBP19.86■□□□□ 0.77
DDX39A-207ENST00000588542 PRLHRP49683 370 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 ITGA8P53708 1063 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 SHC2P98077 582 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 CKAP4Q07065 602 aaKnown RBP19.86■□□□□ 0.77
DDX39A-207ENST00000588542 WHAMMP3Q1A5X7 153 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 ANKRD20A4Q4UJ75 823 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 MSS51Q4VC12 460 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 FASTKD1Q53R41 847 aaKnown RBP19.86■□□□□ 0.77
DDX39A-207ENST00000588542 KIAA0930Q6ICG6 404 aaPredicted RBP19.86■□□□□ 0.77
DDX39A-207ENST00000588542 CASC4Q6P4E1 433 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 PACS1Q6VY07 963 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 TMPRSS7Q7RTY8 843 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 MAATS1Q7Z4T9 603 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 TMEM135Q86UB9 458 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 CLDN19Q8N6F1 224 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 CCDC3Q9BQI4 270 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 SCNM1Q9BWG6 230 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 CATSPERZQ9NTU4 200 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 SCHIP1Q9P0W5 487 aaPredicted RBP19.86■□□□□ 0.77
DDX39A-207ENST00000588542 SAMD15Q9P1V8 674 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 LRIT1Q9P2V4 623 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 KLK13Q9UKR3 277 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 MRFAP1Q9Y605 127 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 PRSS21Q9Y6M0 314 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 KNTC1P50748 2209 aa19.86■□□□□ 0.77
DDX39A-207ENST00000588542 FAM221BA6H8Z2 402 aa19.85■□□□□ 0.77
DDX39A-207ENST00000588542 PPM1DO15297 605 aa19.85■□□□□ 0.77
DDX39A-207ENST00000588542 CD3EAPO15446 510 aaKnown RBP19.85■□□□□ 0.77
DDX39A-207ENST00000588542 BANF1O75531 89 aa19.85■□□□□ 0.77
DDX39A-207ENST00000588542 VAPBO95292 243 aa19.85■□□□□ 0.77
DDX39A-207ENST00000588542 BRAFP15056 766 aa19.85■□□□□ 0.77
DDX39A-207ENST00000588542 PNLIPP16233 465 aa19.85■□□□□ 0.77
DDX39A-207ENST00000588542 PBLDP30039 288 aaPredicted RBP19.85■□□□□ 0.77
DDX39A-207ENST00000588542 NSG1P42857 185 aa19.85■□□□□ 0.77
DDX39A-207ENST00000588542 FOXK2Q01167 660 aa19.85■□□□□ 0.77
DDX39A-207ENST00000588542 NFE2L1Q14494 772 aa19.85■□□□□ 0.77
DDX39A-207ENST00000588542 ZNF658BQ4V348 819 aaPredicted RBP19.85■□□□□ 0.77
DDX39A-207ENST00000588542 LYPLAL1Q5VWZ2 237 aa19.85■□□□□ 0.77
DDX39A-207ENST00000588542 ABRAXAS1Q6UWZ7 409 aa19.85■□□□□ 0.77
DDX39A-207ENST00000588542 CERS6Q6ZMG9 384 aa19.85■□□□□ 0.77
DDX39A-207ENST00000588542 ZNF438Q7Z4V0 828 aa19.85■□□□□ 0.77
DDX39A-207ENST00000588542 LDB1Q86U70 411 aaPredicted RBP19.85■□□□□ 0.77
DDX39A-207ENST00000588542 OR2L2Q8NH16 312 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms