RNA–Protein interactions for RNA: ENST00000588289.1

TMED1-204, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 2 BASIC

Gene TMED1, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-204ENST00000588289 SGK2Q9HBY8 427 aa12.53□□□□□ -0.4
TMED1-204ENST00000588289 FBRSL1Q9HCM7 1045 aaKnown RBP12.53□□□□□ -0.4
TMED1-204ENST00000588289 PFDN4Q9NQP4 134 aa12.53□□□□□ -0.4
TMED1-204ENST00000588289 LATS2Q9NRM7 1088 aa12.53□□□□□ -0.4
TMED1-204ENST00000588289 PHPT1Q9NRX4 125 aaPredicted RBP12.53□□□□□ -0.4
TMED1-204ENST00000588289 FGFR1OP2Q9NVK5 253 aa12.53□□□□□ -0.4
TMED1-204ENST00000588289 OXSMQ9NWU1 459 aa12.53□□□□□ -0.4
TMED1-204ENST00000588289 ANKRD12Q6UB98 2062 aa12.53□□□□□ -0.4
TMED1-204ENST00000588289 TBC1D3DA0A087WVF3 549 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 TBC1D3IA0A087WXS9 549 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 TBC1D3EA0A087X179 549 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 TBC1D3KA0A087X1G2 549 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 TCRBV21S2A2A0A5A6 115 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 TBC1D3FA6NER0 549 aaPredicted RBP12.52□□□□□ -0.41
TMED1-204ENST00000588289 CHURC1-FNTBB4DL54 471 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 TBC1D3LB9A6J9 549 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 BTN3A1O00481 513 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 TOR1BO14657 336 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 EDF1O60869 148 aaKnown RBP12.52□□□□□ -0.41
TMED1-204ENST00000588289 KERAO60938 352 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 NIPSNAP2O75323 286 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 ZNF217O75362 1048 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 IPO13O94829 963 aaKnown RBP12.52□□□□□ -0.41
TMED1-204ENST00000588289 HSPA4LO95757 839 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 ENO2P09104 434 aaPredicted RBP12.52□□□□□ -0.41
TMED1-204ENST00000588289 HIST1H2AGP0C0S8 130 aaPredicted RBP12.52□□□□□ -0.41
TMED1-204ENST00000588289 TBC1D3HP0C7X1 549 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 GFAPP14136 432 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 CD1DP15813 335 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 VCLP18206 1134 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 HIST1H2ADP20671 130 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 BGNP21810 368 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 KELP23276 732 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 DRD3P35462 400 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 CDKN1CP49918 316 aaPredicted RBP12.52□□□□□ -0.41
TMED1-204ENST00000588289 COPAP53621 1224 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 SEMG2Q02383 582 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 PPARDQ03181 441 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 SP140Q13342 867 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 PCLAFQ15004 111 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 PTPRRQ15256 657 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 TECRLQ5HYJ1 363 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 CTSL3PQ5NE16 218 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 TBC1D3GQ6DHY5 549 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 TBC1D3CQ6IPX1 549 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 C16orf46Q6P387 395 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 PAQR3Q6TCH7 311 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 ADAMTSL4Q6UY14 1074 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 SPATA21Q7Z572 469 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 TBC1D3Q8IZP1 549 aaPredicted RBP12.52□□□□□ -0.41
TMED1-204ENST00000588289 DENND6BQ8NEG7 585 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 CD200R1Q8TD46 325 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 SCAMP4Q969E2 229 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 VOPP1Q96AW1 172 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 TMEM159Q96B96 161 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 HIC2Q96JB3 615 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 HIST1H2AHQ96KK5 128 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 HIST1H2AJQ99878 128 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 H2AFJQ9BTM1 129 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 BTBD1Q9H0C5 482 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 IGSF5Q9NSI5 407 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 MRGBPQ9NV56 204 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 CPSF2Q9P2I0 782 aaKnown RBP12.52□□□□□ -0.41
TMED1-204ENST00000588289 ITM2BQ9Y287 266 aa12.52□□□□□ -0.41
TMED1-204ENST00000588289 TNPO3Q9Y5L0 923 aaKnown RBP12.52□□□□□ -0.41
TMED1-204ENST00000588289 SUPT3HB4E1H0 165 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 NARSO43776 548 aaKnown RBP12.51□□□□□ -0.41
TMED1-204ENST00000588289 NPHS1O60500 1241 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 SUPT3HO75486 399 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 KIAA0754O94854 1291 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 CDK14O94921 469 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 C8GP07360 202 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 PRSS56P0CW18 603 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 C7P10643 843 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 IL9P15248 144 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 CYP2A7P20853 494 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 DRD4P21917 467 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 MAGEA9P43362 315 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 SLC1A6P48664 564 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 CLCN7P51798 805 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 SEC24CP53992 1094 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 ABCE1P61221 599 aaKnown RBP12.51□□□□□ -0.41
TMED1-204ENST00000588289 NFKB2Q00653 900 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 TMEM115Q12893 351 aaPredicted RBP12.51□□□□□ -0.41
TMED1-204ENST00000588289 PRKAA1Q13131 559 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 ZNF460Q14592 562 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 UBXN2BQ14CS0 331 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 SETDB1Q15047 1291 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 METTL2BQ6P1Q9 378 aaKnown RBP12.51□□□□□ -0.41
TMED1-204ENST00000588289 NEK10Q6ZWH5 1172 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 SYT13Q7L8C5 426 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 ALYREFQ86V81 257 aaKnown RBP12.51□□□□□ -0.41
TMED1-204ENST00000588289 PIM3Q86V86 326 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 HORMAD1Q86X24 394 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 CACUL1Q86Y37 369 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 GPSM1Q86YR5 675 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 C10orf107Q8IVU9 208 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 PLD6Q8N2A8 252 aaKnown RBP12.51□□□□□ -0.41
TMED1-204ENST00000588289 TCAIMQ8N3R3 496 aa12.51□□□□□ -0.41
TMED1-204ENST00000588289 AADATQ8N5Z0 425 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms