RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 BPHLQ86WA6 291 aaPredicted RBP13.11□□□□□ -0.31
PKN1-211ENST00000588200 RCOR2Q8IZ40 523 aa13.11□□□□□ -0.31
PKN1-211ENST00000588200 DDHD1Q8NEL9 900 aa13.11□□□□□ -0.31
PKN1-211ENST00000588200 ZDHHC12Q96GR4 267 aa13.11□□□□□ -0.31
PKN1-211ENST00000588200 ZNF514Q96K75 400 aaPredicted RBP13.11□□□□□ -0.31
PKN1-211ENST00000588200 CALR3Q96L12 384 aaKnown RBP13.11□□□□□ -0.31
PKN1-211ENST00000588200 MRGPRX2Q96LB1 330 aa13.11□□□□□ -0.31
PKN1-211ENST00000588200 ZCCHC2Q9C0B9 1178 aaKnown RBP13.11□□□□□ -0.31
PKN1-211ENST00000588200 GPN2Q9H9Y4 310 aaPredicted RBP13.11□□□□□ -0.31
PKN1-211ENST00000588200 ARFGAP3Q9NP61 516 aa13.11□□□□□ -0.31
PKN1-211ENST00000588200 WDR70Q9NW82 654 aa13.11□□□□□ -0.31
PKN1-211ENST00000588200 EFR3BQ9Y2G0 817 aa13.11□□□□□ -0.31
PKN1-211ENST00000588200 AGAP14A8MT82 685 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 SPOPO43791 374 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 PMPCBO75439 489 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 ZRANB2O95218 330 aaKnown RBP eCLIP13.1□□□□□ -0.31
PKN1-211ENST00000588200 NOP2P46087 812 aaKnown RBP13.1□□□□□ -0.31
PKN1-211ENST00000588200 GFERP55789 205 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 KCNAB2Q13303 367 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 ITGA9Q13797 1035 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 SLC1A5Q15758 541 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 PPP2R5EQ16537 467 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.1□□□□□ -0.31
PKN1-211ENST00000588200 SIRPB2Q5JXA9 342 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 SNAP47Q5SQN1 464 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 ZNF648Q5T619 568 aaPredicted RBP13.1□□□□□ -0.31
PKN1-211ENST00000588200 PRICKLE2Q7Z3G6 844 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 KDELC2Q7Z4H8 507 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 TRIM48Q8IWZ4 208 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 ZNF567Q8N184 647 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 P3H4Q92791 437 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 CTRCQ99895 268 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 ZMYND15Q9H091 742 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 OSGEPL1Q9H4B0 414 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 SAE1Q9UBE0 346 aaPredicted RBP13.1□□□□□ -0.31
PKN1-211ENST00000588200 PCDHGA6Q9Y5G7 932 aa13.1□□□□□ -0.31
PKN1-211ENST00000588200 hCG_1818297A0A087WSY0 165 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 PDZK1P1A8MUH7 402 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 AKR1B15C9JRZ8 316 aaPredicted RBP13.09□□□□□ -0.31
PKN1-211ENST00000588200 GAPDHSO14556 408 aaPredicted RBP13.09□□□□□ -0.31
PKN1-211ENST00000588200 MAST4O15021 2626 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 NKX2-8O15522 239 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 PECAM1P16284 738 aaPredicted RBP13.09□□□□□ -0.31
PKN1-211ENST00000588200 AMD1P17707 334 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 NELFEP18615 380 aaKnown RBP13.09□□□□□ -0.31
PKN1-211ENST00000588200 NFKB1P19838 968 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 FECHP22830 423 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 SPAM1P38567 509 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 COPS2P61201 443 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 DYNLT1P63172 113 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 ADCY2Q08462 1091 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 CDC20Q12834 499 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 GTF2H3Q13889 308 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 GPR18Q14330 331 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 METRNLQ641Q3 311 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 SARM1Q6SZW1 724 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 CRTC3Q6UUV7 619 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 BBS12Q6ZW61 710 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 AMZ2Q86W34 360 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 KMT5CQ86Y97 462 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 CCDC170Q8IYT3 715 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 CARFQ8N187 725 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 BEND7Q8N7W2 519 aaPredicted RBP13.09□□□□□ -0.31
PKN1-211ENST00000588200 UBXN4Q92575 508 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 OXNAD1Q96HP4 312 aaPredicted RBP13.09□□□□□ -0.31
PKN1-211ENST00000588200 RBM41Q96IZ5 413 aaKnown RBP13.09□□□□□ -0.31
PKN1-211ENST00000588200 SLC41A2Q96JW4 573 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 LINC00615Q96LM1 132 aaPredicted RBP13.09□□□□□ -0.31
PKN1-211ENST00000588200 ANAPC2Q9UJX6 822 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 KCTD3Q9Y597 815 aa13.09□□□□□ -0.31
PKN1-211ENST00000588200 HECTD1Q9ULT8 2610 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 GLYATL1P3A0A0U1RQE8 302 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 OR52A4PA6NMU1 304 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 APOC4-APOC2K7ER74 178 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 MTX2O75431 263 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 APOC2P02655 101 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 MT-ND3P03897 115 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 PYGMP11217 842 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 TYRP1P17643 537 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 RPL10P27635 214 aaKnown RBP13.08□□□□□ -0.32
PKN1-211ENST00000588200 HALP42357 657 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 MAGEA1P43355 309 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 TNNT3P45378 269 aaPredicted RBP13.08□□□□□ -0.32
PKN1-211ENST00000588200 C11orf63Q6NUN7 778 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 KLHL35Q6PF15 583 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 C6orf15Q6UXA7 325 aaPredicted RBP13.08□□□□□ -0.32
PKN1-211ENST00000588200 RANBP10Q6VN20 620 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 PID1Q7Z2X4 250 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 TRAPPC5Q8IUR0 188 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 KLHDC8BQ8IXV7 354 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 RASGEF1AQ8N9B8 481 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 APOBEC4Q8WW27 367 aaKnown RBP13.08□□□□□ -0.32
PKN1-211ENST00000588200 STARD8Q92502 1023 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 CXorf40BQ96DE9 158 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 TTC25Q96NG3 672 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 TGM7Q96PF1 710 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 QKIQ96PU8 341 aaKnown RBP eCLIP13.08□□□□□ -0.32
PKN1-211ENST00000588200 CD180Q99467 661 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 BPIFA1Q9NP55 256 aa13.08□□□□□ -0.32
PKN1-211ENST00000588200 UBP1Q9NZI7 540 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms