RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 KLC4Q9NSK0 619 aa11.71□□□□□ -0.53
SDHDP1-201ENST00000588055 TMPRSS11EQ9UL52 423 aa11.71□□□□□ -0.53
SDHDP1-201ENST00000588055 VPS9D1Q9Y2B5 631 aa11.71□□□□□ -0.53
SDHDP1-201ENST00000588055 DNAJC16Q9Y2G8 782 aa11.71□□□□□ -0.53
SDHDP1-201ENST00000588055 CD3EAPO15446 510 aaKnown RBP11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 SNX2O60749 519 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 NDUFS3O75489 264 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 AP2A2O94973 939 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 TRIM16O95361 564 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 FTH1P02794 183 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 GP1BAP07359 652 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 GSTM1P09488 218 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 OR56A5P0C7T3 313 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 IDSP22304 550 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 IVDP26440 423 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 HALP42357 657 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 PRLHRP49683 370 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 MRPS25P82663 173 aaKnown RBP11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 GSTM4Q03013 218 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 DHX9Q08211 1270 aaKnown RBP11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 DNAJC3Q13217 504 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 DBN1Q16643 649 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 LONRF1Q17RB8 773 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 C14orf28Q4W4Y0 310 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 PACS1Q6VY07 963 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 TRIM48Q8IWZ4 208 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 SLC35F3Q8IY50 421 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 RASGEF1AQ8N9B8 481 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 CCL4L1Q8NHW4 92 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 MAPK15Q8TD08 544 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 CALML6Q8TD86 181 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 FAM167BQ9BTA0 163 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 ZMYND15Q9H091 742 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 CAAP1Q9H8G2 361 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 PCDHGA1Q9Y5H4 931 aa11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 DNMT3AQ9Y6K1 912 aaPredicted RBP11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 ZFC3H1O60293 1989 aaKnown RBP11.7□□□□□ -0.54
SDHDP1-201ENST00000588055 IGLV3-16A0A075B6K0 115 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 UBA6A0AVT1 1052 aaPredicted RBP11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 CPED1A4D0V7 1026 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 OR5K4A6NMS3 321 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 RHPN2P1A8MT19 583 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 GIPC1O14908 333 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 FUCA1P04066 466 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 SLC35G4P0C7Q5 338 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 GIMD1P0DJR0 217 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 OGNP20774 298 aaKnown RBP11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 ACP1P24666 158 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 PPM1FP49593 454 aaPredicted RBP11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 ACADVLP49748 655 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 CDKN1CP49918 316 aaPredicted RBP11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 CLCNKAP51800 687 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 CTSCP53634 463 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 CRYMQ14894 314 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 SEPT7Q16181 437 aaKnown RBP11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 ANKRD20A4Q4UJ75 823 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 SYTL3Q4VX76 610 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 GLE1Q53GS7 698 aaKnown RBP11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 SPANXN3Q5MJ09 141 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 DUPD1Q68J44 220 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 ZNF470Q6ECI4 717 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 CES3Q6UWW8 571 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 CEP128Q6ZU80 1094 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 ERMP1Q7Z2K6 904 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 EFL1Q7Z2Z2 1120 aaKnown RBP11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 TMEM135Q86UB9 458 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 NRROSQ86YC3 692 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 ZNF547Q8IVP9 402 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 LMNTD2Q8IXW0 634 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 PIANPQ8IYJ0 282 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 MMGT1Q8N4V1 131 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 IFI44Q8TCB0 444 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 HM13Q8TCT9 377 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 SGF29Q96ES7 293 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 CFAP36Q96G28 342 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 EBNA1BP2Q99848 306 aaKnown RBP11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 ABCG4Q9H172 646 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 SYNDIG1Q9H7V2 258 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 C20orf96Q9NUD7 363 aaPredicted RBP11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 FAM8A1Q9UBU6 413 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 ZC3H7BQ9UGR2 993 aaKnown RBP11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 GNPTGQ9UJJ9 305 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 PADI4Q9UM07 663 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 CHMP2BQ9UQN3 213 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 DCHS1Q96JQ0 3298 aa11.69□□□□□ -0.54
SDHDP1-201ENST00000588055 KIR2DS5A0A0G2JLQ3 304 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 A0A0G2JNG1 304 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 MGAT4DA6NG13 374 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 ESPNB1AK53 854 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 KIR2DS3K7RE56 304 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 POP7O75817 140 aaKnown RBP11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 PRSS56P0CW18 603 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 F3P13726 295 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 GLB1P16278 677 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 PLTPP55058 493 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 B4GALNT1Q00973 533 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 E2F1Q01094 437 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 GUCY2DQ02846 1103 aa11.68□□□□□ -0.54
SDHDP1-201ENST00000588055 DMPKQ09013 629 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms