RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 PTPRCAPQ14761 206 aa20.31■□□□□ 0.84
CIRBP-209ENST00000586555 PLA2G4EQ3MJ16 856 aa20.31■□□□□ 0.84
CIRBP-209ENST00000586555 GPRC6AQ5T6X5 926 aa20.31■□□□□ 0.84
CIRBP-209ENST00000586555 PPP1R21Q6ZMI0 780 aa20.31■□□□□ 0.84
CIRBP-209ENST00000586555 HEXDCQ8WVB3 486 aa20.31■□□□□ 0.84
CIRBP-209ENST00000586555 SLC39A7Q92504 469 aa20.31■□□□□ 0.84
CIRBP-209ENST00000586555 TMEM159Q96B96 161 aa20.31■□□□□ 0.84
CIRBP-209ENST00000586555 DCUN1D1Q96GG9 259 aa20.31■□□□□ 0.84
CIRBP-209ENST00000586555 AHCYL2Q96HN2 611 aaKnown RBP20.31■□□□□ 0.84
CIRBP-209ENST00000586555 NAF1Q96HR8 494 aaKnown RBP20.31■□□□□ 0.84
CIRBP-209ENST00000586555 ETNK1Q9HBU6 452 aa20.31■□□□□ 0.84
CIRBP-209ENST00000586555 THSD1Q9NS62 852 aa20.31■□□□□ 0.84
CIRBP-209ENST00000586555 FKBPLQ9UIM3 349 aa20.31■□□□□ 0.84
CIRBP-209ENST00000586555 CRLS1Q9UJA2 301 aa20.31■□□□□ 0.84
CIRBP-209ENST00000586555 ATXN7L1Q9ULK2 861 aaPredicted RBP20.31■□□□□ 0.84
CIRBP-209ENST00000586555 KCTD3Q9Y597 815 aa20.31■□□□□ 0.84
CIRBP-209ENST00000586555 COL6A6A6NMZ7 2263 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 KLHL33A6NCF5 533 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 TPH1P17752 444 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 ITGALP20701 1170 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 CXCR5P32302 372 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 NFATC2Q13469 925 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 SEPT6Q14141 434 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 GPR33Q49SQ1 333 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 KHDC1Q4VXA5 237 aaKnown RBP20.3■□□□□ 0.84
CIRBP-209ENST00000586555 FOXR1Q6PIV2 292 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 PCSK4Q6UW60 755 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 OR13C4Q8NGS5 318 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 OR10G6Q8NH81 332 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 PBKQ96KB5 322 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 DPH1Q9BZG8 443 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 ZMYND15Q9H091 742 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 PRDM8Q9NQV8 689 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 RAB6BQ9NRW1 208 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 DNAJC16Q9Y2G8 782 aa20.3■□□□□ 0.84
CIRBP-209ENST00000586555 ZFC3H1O60293 1989 aaKnown RBP20.29■□□□□ 0.84
CIRBP-209ENST00000586555 PDZK1P1A8MUH7 402 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 CDRT15L2A8MXV6 281 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 CFAP99D6REC4 459 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 GAPDHSO14556 408 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-209ENST00000586555 LDB2O43679 373 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 ZNF140P52738 457 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-209ENST00000586555 CXADRP78310 365 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 TMPRSS15P98073 1019 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 SQSTM1Q13501 440 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 POU6F1Q14863 301 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 SKIDA1Q1XH10 827 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-209ENST00000586555 TMEM220Q6QAJ8 160 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 USP53Q70EK8 1073 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 RAB11FIP2Q7L804 512 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 SNX20Q7Z614 316 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 AMZ2Q86W34 360 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 ZNF547Q8IVP9 402 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 TRIM48Q8IWZ4 208 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 FBXO39Q8N4B4 442 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 RASGEF1AQ8N9B8 481 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 STYXQ8WUJ0 223 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 KCNE4Q8WWG9 221 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 NAP1L3Q99457 506 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-209ENST00000586555 CMKLR1Q99788 373 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 FOXP3Q9BZS1 431 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 NLE1Q9NVX2 485 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-209ENST00000586555 SLC23A2Q9UGH3 650 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 ATMQ13315 3056 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 CFAP46Q8IYW2 2715 aa20.29■□□□□ 0.84
CIRBP-209ENST00000586555 IGHV1OR21-1A0A087WYE8 117 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 PMS2P1A4D2B8 440 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 A6NCN8 305 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 PLD2O14939 933 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 KIF5CO60282 957 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 POP7O75817 140 aaKnown RBP20.28■□□□□ 0.84
CIRBP-209ENST00000586555 C1QL1O75973 258 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 SUN1O94901 812 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 EML2O95834 649 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 VIPP01282 170 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 XRCC1P18887 633 aaPredicted RBP20.28■□□□□ 0.84
CIRBP-209ENST00000586555 CD1CP29017 333 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 HALP42357 657 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 UCNP55089 124 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 XIAPP98170 497 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 ZFP36L1Q07352 338 aaKnown RBP20.28■□□□□ 0.84
CIRBP-209ENST00000586555 SEMA5AQ13591 1074 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 SIX1Q15475 284 aaPredicted RBP20.28■□□□□ 0.84
CIRBP-209ENST00000586555 PHF19Q5T6S3 580 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 ABRAXAS1Q6UWZ7 409 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 WASH2PQ6VEQ5 465 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 B3GNT8Q7Z7M8 397 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 SNRNP27Q8WVK2 155 aaKnown RBP20.28■□□□□ 0.84
CIRBP-209ENST00000586555 EPB41L1Q9H4G0 881 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 RDH14Q9HBH5 336 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 WASH6PQ9NQA3 447 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 CPNE7Q9UBL6 633 aa20.28■□□□□ 0.84
CIRBP-209ENST00000586555 OR2AG2A6NM03 316 aa20.27■□□□□ 0.84
CIRBP-209ENST00000586555 AGAP14A8MT82 685 aa20.27■□□□□ 0.84
CIRBP-209ENST00000586555 H7C0S8 307 aa20.27■□□□□ 0.84
CIRBP-209ENST00000586555 AP3B1O00203 1094 aa20.27■□□□□ 0.84
CIRBP-209ENST00000586555 DUX1O43812 170 aa20.27■□□□□ 0.84
CIRBP-209ENST00000586555 PRB1P04280 392 aa20.27■□□□□ 0.84
CIRBP-209ENST00000586555 APRTP07741 180 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms