RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PLA2G15Q8NCC3 412 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 GPR26Q8NDV2 337 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 OR13C4Q8NGS5 318 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 NETO1Q8TDF5 533 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 SCAMP4Q969E2 229 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 SLC6A18Q96N87 628 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 MYOCQ99972 504 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 NSRP1Q9H0G5 558 aaKnown RBP12.51□□□□□ -0.41
VMP1-202ENST00000585847 SYTL2Q9HCH5 934 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 PARD6AQ9NPB6 346 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 SNX15Q9NRS6 342 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 CD84Q9UIB8 345 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 PSAT1Q9Y617 370 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 ATXN2Q99700 1313 aaKnown RBP12.51□□□□□ -0.41
VMP1-202ENST00000585847 TMEM131Q92545 1883 aa12.51□□□□□ -0.41
VMP1-202ENST00000585847 SPTBN2O15020 2390 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.5□□□□□ -0.41
VMP1-202ENST00000585847 HMX2A2RU54 273 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 POM121BA6NF01 834 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 MEI4A8MW99 385 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 H0Y8X5 98 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 K7ESM1 405 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 PRMT5O14744 637 aaPredicted RBP12.5□□□□□ -0.41
VMP1-202ENST00000585847 TPP1O14773 563 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 LZTS3O60299 673 aaPredicted RBP12.5□□□□□ -0.41
VMP1-202ENST00000585847 LRP3O75074 770 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 H2AFYO75367 372 aaKnown RBP12.5□□□□□ -0.41
VMP1-202ENST00000585847 SRP72O76094 671 aaKnown RBP12.5□□□□□ -0.41
VMP1-202ENST00000585847 S1PR4O95977 384 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 RETP07949 1114 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 PYGBP11216 843 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 RALBP11234 206 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 CHN1P15882 459 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 HNRNPA2B1P22626 353 aaKnown RBP12.5□□□□□ -0.41
VMP1-202ENST00000585847 TEAD1P28347 426 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 CLDN2P57739 230 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 NAA20P61599 178 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 XIAPP98170 497 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 BNC1Q01954 994 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 ACOX1Q15067 660 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 IRF4Q15306 451 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 ST3GAL2Q16842 350 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 FAM83EQ2M2I3 478 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 SETMARQ53H47 684 aaPredicted RBP12.5□□□□□ -0.41
VMP1-202ENST00000585847 PPM1JQ5JR12 505 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 TPRG1LQ5T0D9 272 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 HENMT1Q5T8I9 393 aaKnown RBP12.5□□□□□ -0.41
VMP1-202ENST00000585847 HHATQ5VTY9 493 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 LAYNQ6UX15 382 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 PTAR1Q7Z6K3 402 aaPredicted RBP12.5□□□□□ -0.41
VMP1-202ENST00000585847 TBC1D1Q86TI0 1168 aaPredicted RBP12.5□□□□□ -0.41
VMP1-202ENST00000585847 UNC5BQ8IZJ1 945 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 TRAM1L1Q8N609 369 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 DENND1AQ8TEH3 1009 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 SNX19Q92543 992 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 LPGAT1Q92604 370 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 MRRFQ96E11 262 aaKnown RBP12.5□□□□□ -0.41
VMP1-202ENST00000585847 VPS35Q96QK1 796 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 ZCCHC2Q9C0B9 1178 aaKnown RBP12.5□□□□□ -0.41
VMP1-202ENST00000585847 TM9SF3Q9HD45 589 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 BPIFA1Q9NP55 256 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 GPR27Q9NS67 375 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 TAS2R13Q9NYV9 303 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 FKBPLQ9UIM3 349 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 GNPTGQ9UJJ9 305 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 DMTF1Q9Y222 760 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 ACOT9Q9Y305 439 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 PLLPQ9Y342 182 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 LRP4O75096 1905 aa12.5□□□□□ -0.41
VMP1-202ENST00000585847 TPRP12270 2363 aaKnown RBP12.5□□□□□ -0.41
VMP1-202ENST00000585847 A0A096LPK6 155 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 KLHL33A6NCF5 533 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 FADS2P1A8MWK0 482 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 CCL22O00626 93 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 KLF11O14901 512 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 FOXD2O60548 495 aaPredicted RBP12.49□□□□□ -0.41
VMP1-202ENST00000585847 VPS26AO75436 327 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 AP2A2O94973 939 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 ASMTLO95671 621 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 SLC4A1P02730 911 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 ADRB1P08588 477 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 TGM1P22735 817 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 NUDT1P36639 197 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 NSG1P42857 185 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 MAPK9P45984 424 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 PFN3P60673 137 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 DPTQ07507 201 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 BMPR2Q13873 1038 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 PLA2G2CQ5R387 149 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 AGAP9Q5VTM2 703 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 ABI3BPQ7Z7G0 1075 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 CLEC14AQ86T13 490 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 DENND6AQ8IWF6 608 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 C4orf33Q8N1A6 199 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 NXPE1Q8N323 547 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 DENND6BQ8NEG7 585 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 NUS1Q96E22 293 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 CCDC126Q96EE4 140 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 LOXL4Q96JB6 756 aa12.49□□□□□ -0.41
VMP1-202ENST00000585847 SERAC1Q96JX3 654 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms