RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 LCA5Q86VQ0 697 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 BANPQ8N9N5 519 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 CD200R1Q8TD46 325 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 SCARF2Q96GP6 870 aaPredicted RBP15.92■□□□□ 0.14
SS18-226ENST00000585241 LINC00615Q96LM1 132 aaPredicted RBP15.92■□□□□ 0.14
SS18-226ENST00000585241 GPR34Q9UPC5 381 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 INVSQ9Y283 1065 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 SLC17A4Q9Y2C5 497 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 ANKRD6Q9Y2G4 727 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 DHRS7Q9Y394 339 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 OR1A2Q9Y585 309 aa15.92■□□□□ 0.14
SS18-226ENST00000585241 KMT2EQ8IZD2 1858 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 A0A087X1B8 175 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 A0A096LPK6 155 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 A6NNZ2 444 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 TNFRSF10AO00220 468 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 CACNB4O00305 520 aaPredicted RBP15.91■□□□□ 0.14
SS18-226ENST00000585241 PRPF4O43172 522 aaKnown RBP eCLIP15.91■□□□□ 0.14
SS18-226ENST00000585241 PHGDHO43175 533 aaKnown RBP15.91■□□□□ 0.14
SS18-226ENST00000585241 TYROBPO43914 113 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 NUAK1O60285 661 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 DNAJC6O75061 913 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 CDK14O94921 469 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 GSTM1P09488 218 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 COL6A2P12110 1019 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 CREB1P16220 341 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 ZNF37AP17032 561 aaPredicted RBP15.91■□□□□ 0.14
SS18-226ENST00000585241 ZNF8P17098 575 aaPredicted RBP15.91■□□□□ 0.14
SS18-226ENST00000585241 CLDN2P57739 230 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 GSTM4Q03013 218 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 CSTF1Q05048 431 aaKnown RBP15.91■□□□□ 0.14
SS18-226ENST00000585241 GBX1Q14549 363 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 ZNF658BQ4V348 819 aaPredicted RBP15.91■□□□□ 0.14
SS18-226ENST00000585241 TAF1BQ53T94 588 aaPredicted RBP15.91■□□□□ 0.14
SS18-226ENST00000585241 UGT3A1Q6NUS8 523 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 PIM3Q86V86 326 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 C4orf33Q8N1A6 199 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 GIMAP7Q8NHV1 300 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 GAB3Q8WWW8 586 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 DNASE2BQ8WZ79 361 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 SGF29Q96ES7 293 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 APOPT1Q96IL0 206 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 UBXN10Q96LJ8 280 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 SMC6Q96SB8 1091 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 GPR21Q99679 349 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 MYOCQ99972 504 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 TSSK1BQ9BXA7 367 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 C1QTNF1Q9BXJ1 281 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 OR2AG1Q9H205 316 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 RMI1Q9H9A7 625 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 SPATS2LQ9NUQ6 558 aaKnown RBP15.91■□□□□ 0.14
SS18-226ENST00000585241 PCMTD2Q9NV79 361 aa15.91■□□□□ 0.14
SS18-226ENST00000585241 IQCF5A8MTL0 148 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 E5RI56 91 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 H0Y8X5 98 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 GOLGA8RI6L899 631 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 MAGEC1O60732 1142 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 FTH1P02794 183 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 CHRM3P20309 590 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 KELP23276 732 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 CRHR1P34998 444 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 RABIFP47224 123 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 SLC18A1P54219 525 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 PDAP1Q13442 181 aaKnown RBP15.9■□□□□ 0.14
SS18-226ENST00000585241 GTF2H3Q13889 308 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 ZNF460Q14592 562 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 INSCQ1MX18 579 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 PPM1JQ5JR12 505 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 TMEM220Q6QAJ8 160 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 TMEM207Q6UWW9 146 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 DET1Q7L5Y6 550 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 C11orf96Q7Z7L8 435 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 ZNF547Q8IVP9 402 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 KRT222Q8N1A0 295 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 OXR1Q8N573 874 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 C1orf216Q8TAB5 229 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 NAT14Q8WUY8 206 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 SLC30A3Q99726 388 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 SYTL2Q9HCH5 934 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 GPAMQ9HCL2 828 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 C11orf16Q9NQ32 467 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 GALPQ9UBC7 116 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 TRMT6Q9UJA5 497 aaKnown RBP15.9■□□□□ 0.14
SS18-226ENST00000585241 TLK1Q9UKI8 766 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 SMG5Q9UPR3 1016 aaKnown RBP15.9■□□□□ 0.14
SS18-226ENST00000585241 CA5BQ9Y2D0 317 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 TMEM98Q9Y2Y6 226 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 ACOT9Q9Y305 439 aa15.9■□□□□ 0.14
SS18-226ENST00000585241 DNMT3AQ9Y6K1 912 aaPredicted RBP15.9■□□□□ 0.14
SS18-226ENST00000585241 ABCA7Q8IZY2 2146 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 A0A1W2PR77 199 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 OR2AG2A6NM03 316 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 EIF3FO00303 357 aaPredicted RBP15.89■□□□□ 0.13
SS18-226ENST00000585241 TNFRSF10CO14798 259 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 KPNA5O15131 536 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 GPR37L1O60883 481 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 GLRA3O75311 464 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 CEACAM5P06731 702 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 GSTA1P08263 222 aa15.89■□□□□ 0.13
SS18-226ENST00000585241 BRAFP15056 766 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms