RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 ZNF33AQ06730 810 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 PRKG2Q13237 762 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 PTGR1Q14914 329 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 TGFBIQ15582 683 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 AAGABQ6PD74 315 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 TRMT11Q7Z4G4 463 aaKnown RBP11.17□□□□□ -0.62
TOP3A-217ENST00000584582 ADGRG2Q8IZP9 1017 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 CBR4Q8N4T8 237 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 LMNTD1Q8N9Z9 388 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 FAM47BQ8NA70 645 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 KREMEN2Q8NCW0 462 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 APOLD1Q96LR9 279 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 EBPLQ9BY08 206 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 PDP2Q9P2J9 529 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 SPASTQ9UBP0 616 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 POLG2Q9UHN1 485 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 LZTS1Q9Y250 596 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 CFAP99D6REC4 459 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 FAM58BPP0C7Q3 252 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 EPB42P16452 691 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 RPL10P27635 214 aaKnown RBP11.17□□□□□ -0.62
TOP3A-217ENST00000584582 CD70P32970 193 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 CHN2P52757 468 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 LRRC74AQ0VAA2 488 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 NEDD8Q15843 81 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 CACHD1Q5VU97 1274 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 TMEM214Q6NUQ4 689 aaKnown RBP11.17□□□□□ -0.62
TOP3A-217ENST00000584582 TMC5Q6UXY8 1006 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 SLC22A15Q8IZD6 547 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 TRMOQ9BU70 441 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 TMEM106CQ9BVX2 250 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 GSTO2Q9H4Y5 243 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 ZNF490Q9ULM2 529 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-217ENST00000584582 CORO1CQ9ULV4 474 aaPredicted RBP11.17□□□□□ -0.62
TOP3A-217ENST00000584582 CLEC4EQ9ULY5 219 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 LCTP09848 1927 aa11.17□□□□□ -0.62
TOP3A-217ENST00000584582 IGLV3-25P01717 112 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 DGKAP23743 735 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 CALRP27797 417 aaKnown RBP11.16□□□□□ -0.62
TOP3A-217ENST00000584582 LIPEQ05469 1076 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 MANEALQ5VSG8 457 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 ZNF621Q6ZSS3 439 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 USP45Q70EL2 814 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 TRIM74Q86UV6 250 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 RBFAQ8N0V3 343 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 CPSF7Q8N684 471 aaKnown RBP11.16□□□□□ -0.62
TOP3A-217ENST00000584582 AURKBQ96GD4 344 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-217ENST00000584582 ALG2Q9H553 416 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 PCDH12Q9NPG4 1184 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 ATG2BQ96BY7 2078 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 FFAR2O15552 330 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 MLYCDO95822 493 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 MSH3P20585 1137 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 GSTT1P30711 240 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 RPIAP49247 311 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 MAPKAPK3Q16644 382 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 TRIM71Q2Q1W2 868 aaKnown RBP11.16□□□□□ -0.62
TOP3A-217ENST00000584582 UBE2R2Q712K3 238 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-217ENST00000584582 SYVN1Q86TM6 617 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 CATSPER1Q8NEC5 780 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 OR4F6Q8NGB9 312 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 ZFYVE19Q96K21 471 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 PHF12Q96QT6 1004 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 MTERF1Q99551 399 aaKnown RBP11.16□□□□□ -0.62
TOP3A-217ENST00000584582 C1orf21Q9H246 121 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 OSGEPL1Q9H4B0 414 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 DYRK4Q9NR20 520 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 SLAMF8Q9P0V8 285 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 VPS4AQ9UN37 437 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 TDRKHQ9Y2W6 561 aaKnown RBP11.16□□□□□ -0.62
TOP3A-217ENST00000584582 PARP14Q460N5 1801 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 PTGES3LE9PB15 166 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 CLOCKO15516 846 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 IL1BP01584 269 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 POLR2JP52435 117 aaKnown RBP11.16□□□□□ -0.62
TOP3A-217ENST00000584582 IRF8Q02556 426 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 VAC14Q08AM6 782 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 GTF2H2Q13888 395 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 KRT33BQ14525 404 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 ZNF284Q2VY69 593 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 FAM174BQ3ZCQ3 159 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 GTF2H2CQ6P1K8 395 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 CRTC3Q6UUV7 619 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 ADAMTSL2Q86TH1 951 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 GPR78Q96P69 363 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 PKMYT1Q99640 499 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 LINC00597Q9H2U6 94 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 ZNF334Q9HCZ1 680 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-217ENST00000584582 LMCD1Q9NZU5 365 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 FAF1Q9UNN5 650 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-217ENST00000584582 USP22Q9UPT9 525 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 PTPRFP10586 1907 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 HTTP42858 3142 aa11.16□□□□□ -0.62
TOP3A-217ENST00000584582 ZNF195O14628 629 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 G6PDP11413 515 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 POLR2EP19388 210 aaKnown RBP11.15□□□□□ -0.62
TOP3A-217ENST00000584582 PAX3P23760 479 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 HNF1BP35680 557 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 DPP6P42658 865 aa11.15□□□□□ -0.62
TOP3A-217ENST00000584582 YAP1P46937 504 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms