RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	RRP8	O43159	456 aa	Known RBP	11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	GOSR1	O95249	250 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	RPLP2	P05387	115 aa	Known RBP	11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	CCL5	P13501	91 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	TAS2R39	P59534	338 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	MAX	P61244	160 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	ARL13B	Q3SXY8	428 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	ZNF470	Q6ECI4	717 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	LRRC8E	Q6NSJ5	796 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	TRAF7	Q6Q0C0	670 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	C16orf89	Q6UX73	402 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	MEX3B	Q6ZN04	569 aa	Known RBP	11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	SCAI	Q8N9R8	606 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	HEXDC	Q8WVB3	486 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	ACPT	Q9BZG2	426 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	HIPK3	Q9H422	1215 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	NCOR1P1	Q9H4R4	102 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	RCOR3	Q9P2K3	495 aa	Predicted RBP	11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	CDH9	Q9ULB4	789 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	AURKC	Q9UQB9	309 aa		11.51	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	LRRC14B	A6NHZ5	514 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	GOLGA8CP	A6NN73	597 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	GNAO1	P09471	354 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	ALOX5	P09917	674 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	FAM58BP	P0C7Q3	252 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	THEGL	P0DJG4	465 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	CHRM3	P20309	590 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	ARNT	P27540	789 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	SLC5A2	P31639	672 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	GPR15	P49685	360 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	NKX3-2	P78367	333 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	CDK18	Q07002	472 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	OR7E24	Q6IFN5	339 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	DCLRE1A	Q6PJP8	1040 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	CLEC14A	Q86T13	490 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	IFNE	Q86WN2	208 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	ATAD1	Q8NBU5	361 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	PSD4	Q8NDX1	1056 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	LPGAT1	Q92604	370 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	SMARCD1	Q96GM5	515 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	TEKT5	Q96M29	485 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	GAL3ST1	Q99999	423 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	SIKE1	Q9BRV8	207 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	STN1	Q9H668	368 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	SOX17	Q9H6I2	414 aa	Predicted RBP	11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	AFF4	Q9UHB7	1163 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	CIDEB	Q9UHD4	219 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	SNX6	Q9UNH7	406 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	TBC1D30	Q9Y2I9	924 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	SLC27A5	Q9Y2P5	690 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	RNF11	Q9Y3C5	154 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	PCDHGA3	Q9Y5H0	932 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	TSC2	P49815	1807 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	FAM95C	A0A1B0GW59	222 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	PRORSD1P	A6NEY8	169 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	OR51F1	A6NGY5	319 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	CAPNS1	P04632	268 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	MAGEA12	P43365	314 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	HTR3A	P46098	478 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	MLLT6	P55198	1093 aa	Predicted RBP	11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	PSME3	P61289	254 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	TLE2	Q04725	743 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	GALNT2	Q10471	571 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	BFSP2	Q13515	415 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	PRPSAP1	Q14558	356 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	MGAT5B	Q3V5L5	792 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	SPOUT1	Q5T280	376 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	BORA	Q6PGQ7	559 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	TRIM67	Q6ZTA4	783 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	CYS1	Q717R9	158 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	CHST15	Q7LFX5	561 aa	Predicted RBP	11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	TFAP2D	Q7Z6R9	452 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	FAM126B	Q8IXS8	530 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	ZBTB44	Q8NCP5	570 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	NCSTN	Q92542	709 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	HSPBAP1	Q96EW2	488 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	TBATA	Q96M53	351 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	TMEM79	Q9BSE2	394 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	C1QTNF1	Q9BXJ1	281 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	SLC39A8	Q9C0K1	460 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	RAD21L1	Q9H4I0	556 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	EFCAB1	Q9HAE3	211 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	NEU3	Q9UQ49	428 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	ACOT9	Q9Y305	439 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	GUCY1B2	O75343	617 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	SLC1A2	P43004	574 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	OLR1	P78380	273 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	SQSTM1	Q13501	440 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	FRG1	Q14331	258 aa	Known RBP	11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	PTPRCAP	Q14761	206 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	VEPH1	Q14D04	833 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	ITPRIPL1	Q6GPH6	555 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	ZYG11A	Q6WRX3	759 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	GALNTL5	Q7Z4T8	443 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	AKAP14	Q86UN6	197 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	SLC51B	Q86UW2	128 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	ARHGAP12	Q8IWW6	846 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	KDM1B	Q8NB78	822 aa		11.5	□□□□□ -0.57
CDK5RAP3-231	ENST00000584063	RP9	Q8TA86	221 aa	Known RBP	11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms