RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 EID2BQ96D98 161 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 OR6C1Q96RD1 312 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 FSD1LQ9BXM9 530 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TRABDQ9H4I3 376 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ZNF768Q9H5H4 540 aaKnown RBP8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 GLOD4Q9HC38 313 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 UBP1Q9NZI7 540 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 PCDHB3Q9Y5E6 796 aa8.57□□□□□ -1.04
CDK5RAP3-229ENST00000583697 C3orf70A6NLC5 250 aaPredicted RBP8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 OR52A4PA6NMU1 304 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 MTSS1O43312 755 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 PSTPIP1O43586 416 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 NFKB1P19838 968 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 PTPN3P26045 913 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 OAS2P29728 719 aaKnown RBP8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 AKT1P31749 480 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 HMGCLP35914 325 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 DLSTP36957 453 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 SLC19A1P41440 591 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 NR2C2P49116 596 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 NAP1L1P55209 391 aaKnown RBP8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 KIF5AQ12840 1032 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TMEM115Q12893 351 aaPredicted RBP8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ITGA9Q13797 1035 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 GPR18Q14330 331 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 PRKD1Q15139 912 aaPredicted RBP8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ATP13A5Q4VNC0 1218 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TEX44Q53QW1 395 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 KAZNQ674X7 775 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 IRGCQ6NXR0 463 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 KLHL35Q6PF15 583 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ABRAXAS1Q6UWZ7 409 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 B4GALNT4Q76KP1 1039 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TIPARPQ7Z3E1 657 aaKnown RBP8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 PRSS42Q7Z5A4 293 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 PPP1R3BQ86XI6 285 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 CCDC50Q8IVM0 306 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 BRSK1Q8TDC3 778 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 BLOC1S5Q8TDH9 187 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 APOBEC4Q8WW27 367 aaKnown RBP8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 RSC1A1Q92681 617 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 P3H4Q92791 437 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 HAUS1Q96CS2 278 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ZDHHC12Q96GR4 267 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TEKT5Q96M29 485 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 BPIFA1Q9NP55 256 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 OGFRQ9NZT2 677 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 HACD3Q9P035 362 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 SCHIP1Q9P0W5 487 aaPredicted RBP8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ZNF624Q9P2J8 865 aaPredicted RBP8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TRIM10Q9UDY6 481 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 SLC23A2Q9UGH3 650 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 FAM153AQ9UHL3 310 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 LNPEPQ9UIQ6 1025 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ANAPC2Q9UJX6 822 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 INTUQ9ULD6 942 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 PKP3Q9Y446 797 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 KCTD3Q9Y597 815 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 SPO11Q9Y5K1 396 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 RPS6KL1Q9Y6S9 549 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 COL6A6A6NMZ7 2263 aa8.56□□□□□ -1.04
CDK5RAP3-229ENST00000583697 GLYATL1P3A0A0U1RQE8 302 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 MACROD2A1Z1Q3 448 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 F5H423 210 aaPredicted RBP8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 AURKAO14965 403 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 NKX2-8O15522 239 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ZSCAN12O43309 604 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 CST8O60676 142 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 KCNJ13O60928 360 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 KIAA0754O94854 1291 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 LCA5LO95447 670 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 MT-ND3P03897 115 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 CCDC175P0C221 793 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 BRAFP15056 766 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 PECAM1P16284 738 aaPredicted RBP8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 HLA-DPA1P20036 260 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 COMTP21964 271 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 PBLDP30039 288 aaPredicted RBP8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 LEPRP48357 1165 aaKnown RBP8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 ARL4DP49703 201 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 SH3BP2P78314 561 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 CCZ1BP86790 482 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 CCZ1P86791 482 aaPredicted RBP8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 XRCC4Q13426 336 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TUBB3Q13509 450 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 IL11RAQ14626 422 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 NOMO1Q15155 1222 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 DEFB109BQ30KR1 87 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 KHDC1Q4VXA5 237 aaKnown RBP8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 CRTC2Q53ET0 693 aaPredicted RBP8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 LACTB2Q53H82 288 aaPredicted RBP8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 TFDP3Q5H9I0 405 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 LDLRAP1Q5SW96 308 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 FAM182AQ5T1J6 154 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 AGAP9Q5VTM2 703 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 CACHD1Q5VU97 1274 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 C6orf15Q6UXA7 325 aaPredicted RBP8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 MFSD7Q6UXD7 560 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 FAM151BQ6UXP7 276 aa8.55□□□□□ -1.04
CDK5RAP3-229ENST00000583697 FAM92BQ6ZTR7 304 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms