RNA–Protein interactions for RNA: ENST00000583548.1

NUP85-221, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-221ENST00000583548 HALP42357 657 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 RENBPP51606 427 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 ARG2P78540 354 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 FKBP3Q00688 224 aaKnown RBP6.2□□□□□ -1.42
NUP85-221ENST00000583548 MYBPHQ13203 477 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 GPR18Q14330 331 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 RFTN1Q14699 578 aaPredicted RBP6.2□□□□□ -1.42
NUP85-221ENST00000583548 CDSNQ15517 529 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 GPR19Q15760 415 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 C3AR1Q16581 482 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 PTCHD3Q3KNS1 767 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 FAM173BQ6P4H8 233 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 ABRAXAS1Q6UWZ7 409 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 Q6ZPB1 254 aaPredicted RBP6.2□□□□□ -1.42
NUP85-221ENST00000583548 B4GALNT4Q76KP1 1039 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 ARCQ7LC44 396 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 BNIPLQ7Z465 357 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 TRIM74Q86UV6 250 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 DMRTC2Q8IXT2 367 aaPredicted RBP6.2□□□□□ -1.42
NUP85-221ENST00000583548 GRAMD1CQ8IYS0 662 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 WDTC1Q8N5D0 677 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 DNAAF3Q8N9W5 541 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 NETO2Q8NC67 525 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 FNIP1Q8TF40 1166 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 NRGNQ92686 78 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 SDCCAG3Q96C92 435 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 SCRN2Q96FV2 425 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 PAGE5Q96GU1 130 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 TAAR6Q96RI8 345 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 MAP3K3Q99759 626 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 TSG101Q99816 390 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 CINPQ9BW66 212 aaPredicted RBP6.2□□□□□ -1.42
NUP85-221ENST00000583548 GTPBP4Q9BZE4 634 aaKnown RBP6.2□□□□□ -1.42
NUP85-221ENST00000583548 ABCG8Q9H221 673 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 CATSPERBQ9H7T0 1116 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 SEPT11Q9NVA2 429 aaKnown RBP6.2□□□□□ -1.42
NUP85-221ENST00000583548 GPATCH2LQ9NWQ4 482 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 ZNF624Q9P2J8 865 aaPredicted RBP6.2□□□□□ -1.42
NUP85-221ENST00000583548 TINAGQ9UJW2 476 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 DNPEPQ9ULA0 475 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 MAPK8IP1Q9UQF2 711 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 PRKAB1Q9Y478 270 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 MYO7BQ6PIF6 2116 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 ZGRF1Q86YA3 2104 aa6.2□□□□□ -1.42
NUP85-221ENST00000583548 CCDC78A2IDD5 438 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 CCDC66A2RUB6 948 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 E7EQ34 232 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 E9PLN8 166 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 NUAK1O60285 661 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 PRAMEF2O60811 474 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 PRAMEF11O60813 436 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 ZRANB2O95218 330 aaKnown RBP eCLIP6.19□□□□□ -1.42
NUP85-221ENST00000583548 ATP1A1P05023 1023 aaKnown RBP6.19□□□□□ -1.42
NUP85-221ENST00000583548 VCLP18206 1134 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 LHCGRP22888 699 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 EPHB2P29323 1055 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 KRT9P35527 623 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 SCNN1BP51168 640 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 RABEP1Q15276 862 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 INSCQ1MX18 579 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 PTPN20Q4JDL3 420 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 KRTCAP3Q53RY4 240 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 FAM102AQ5T9C2 384 aaPredicted RBP6.19□□□□□ -1.42
NUP85-221ENST00000583548 AGAP9Q5VTM2 703 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 MLIPQ5VWP3 458 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 ARMC6Q6NXE6 501 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 WASH2PQ6VEQ5 465 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 KRBA2Q6ZNG9 492 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 PPP1R32Q7Z5V6 425 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 PHLDB2Q86SQ0 1253 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 OOSP2Q86WS3 158 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 SPPL2CQ8IUH8 684 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 GPR135Q8IZ08 494 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 CLYBLQ8N0X4 340 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 UMODL1-AS1Q8N2C9 162 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 TSEN2Q8NCE0 465 aaKnown RBP6.19□□□□□ -1.42
NUP85-221ENST00000583548 MSANTD4Q8NCY6 345 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 SIMC1Q8NDZ2 872 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 MYRIPQ8NFW9 859 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 SUN3Q8TAQ9 357 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 THAP3Q8WTV1 239 aaPredicted RBP6.19□□□□□ -1.42
NUP85-221ENST00000583548 ASB5Q8WWX0 329 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 TMEM158Q8WZ71 300 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 ZNF396Q96N95 335 aaPredicted RBP6.19□□□□□ -1.42
NUP85-221ENST00000583548 SECISBP2Q96T21 854 aaKnown RBP6.19□□□□□ -1.42
NUP85-221ENST00000583548 VKORC1Q9BQB6 163 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 AP1M1Q9BXS5 423 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 POLDIP3Q9BY77 421 aaKnown RBP6.19□□□□□ -1.42
NUP85-221ENST00000583548 KLC2Q9H0B6 622 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 NOL6Q9H6R4 1146 aaKnown RBP6.19□□□□□ -1.42
NUP85-221ENST00000583548 PDFQ9HBH1 243 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 MRM3Q9HC36 420 aaKnown RBP6.19□□□□□ -1.42
NUP85-221ENST00000583548 SLC6A20Q9NP91 592 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 KLC4Q9NSK0 619 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 SIK3Q9Y2K2 1263 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 ZNF835Q9Y2P0 537 aa6.19□□□□□ -1.42
NUP85-221ENST00000583548 PRRC2AP48634 2157 aaKnown RBP6.18□□□□□ -1.42
NUP85-221ENST00000583548 NCOA6Q14686 2063 aaPredicted RBP6.18□□□□□ -1.42
NUP85-221ENST00000583548 OR5K3A6NET4 321 aa6.18□□□□□ -1.42
NUP85-221ENST00000583548 NPIPB15A6NHN6 443 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms