RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 AFF3P51826 1226 aaKnown RBP9.4□□□□□ -0.9
RFFL-210ENST00000582308 THOP1P52888 689 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 PGGT1BP53609 377 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 LIMK2P53671 638 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 CDKN2DP55273 166 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 BNC1Q01954 994 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 IFFO1Q0D2I5 559 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 OVGP1Q12889 678 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 EIF2B5Q13144 721 aaKnown RBP9.4□□□□□ -0.9
RFFL-210ENST00000582308 BMPR2Q13873 1038 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 FZD2Q14332 565 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 RASA2Q15283 850 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 ALG11Q2TAA5 492 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 MROH9Q5TGP6 573 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 PEAR1Q5VY43 1037 aaPredicted RBP9.4□□□□□ -0.9
RFFL-210ENST00000582308 PTRHD1Q6GMV3 140 aaKnown RBP9.4□□□□□ -0.9
RFFL-210ENST00000582308 ENPP7Q6UWV6 458 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 LRIG3Q6UXM1 1119 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 DCP2Q8IU60 420 aaKnown RBP9.4□□□□□ -0.9
RFFL-210ENST00000582308 SYT12Q8IV01 421 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 CYP4X1Q8N118 509 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 KRT222Q8N1A0 295 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 DCLK2Q8N568 766 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 BEND7Q8N7W2 519 aaPredicted RBP9.4□□□□□ -0.9
RFFL-210ENST00000582308 OR56A4Q8NGH8 313 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 LKAAEAR1Q8TD35 194 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 TSACCQ96A04 125 aaPredicted RBP9.4□□□□□ -0.9
RFFL-210ENST00000582308 GPR22Q99680 433 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 PRRX2Q99811 253 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 ROPN1BQ9BZX4 212 aaPredicted RBP9.4□□□□□ -0.9
RFFL-210ENST00000582308 ZCCHC2Q9C0B9 1178 aaKnown RBP9.4□□□□□ -0.9
RFFL-210ENST00000582308 PPCSQ9HAB8 311 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 ROPN1Q9HAT0 212 aaPredicted RBP9.4□□□□□ -0.9
RFFL-210ENST00000582308 GALPQ9UBC7 116 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 ZNHIT2Q9UHR6 403 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 KLF15Q9UIH9 416 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 CORO1CQ9ULV4 474 aaPredicted RBP9.4□□□□□ -0.9
RFFL-210ENST00000582308 VWA7Q9Y334 891 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 PRKAB1Q9Y478 270 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 PCDHB1Q9Y5F3 818 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 IKBKGQ9Y6K9 419 aa9.4□□□□□ -0.9
RFFL-210ENST00000582308 A0A1B0GVT2 93 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 FAM95CA0A1B0GW59 222 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 FOXO6A8MYZ6 492 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 PRR5-ARHGAP8B1AHC4 643 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 GPR89AB7ZAQ6 455 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 AGPSO00116 658 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 MAP2K7O14733 419 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 SCAMP1O15126 338 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 GRID2O43424 1007 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 CDH16O75309 829 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 SNRPAP09012 282 aaKnown RBP9.39□□□□□ -0.91
RFFL-210ENST00000582308 OR56A5P0C7T3 313 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 GPR89BP0CG08 455 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 GNSP15586 552 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 ITGB6P18564 788 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 HTR1BP28222 390 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 PRLHRP49683 370 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 NXPH1P58417 271 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 TAS2R39P59534 338 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 SRP54P61011 504 aaKnown RBP9.39□□□□□ -0.91
RFFL-210ENST00000582308 GTF2H3Q13889 308 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 PTK2BQ14289 1009 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 TEAD4Q15561 434 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 ZNF658BQ4V348 819 aaPredicted RBP9.39□□□□□ -0.91
RFFL-210ENST00000582308 BCL7AQ4VC05 210 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 PYCR3Q53H96 274 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 HECTD2Q5U5R9 776 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 ZC3H14Q6PJT7 736 aaKnown RBP9.39□□□□□ -0.91
RFFL-210ENST00000582308 CRTC3Q6UUV7 619 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 C11orf96Q7Z7L8 435 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 PIM3Q86V86 326 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 TRAPPC5Q8IUR0 188 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 HID1Q8IV36 788 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 GPATCH11Q8N954 259 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 FAM136AQ96C01 138 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 PDXPQ96GD0 296 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 LOXL4Q96JB6 756 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 ELMO2Q96JJ3 720 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 ZNF514Q96K75 400 aaPredicted RBP9.39□□□□□ -0.91
RFFL-210ENST00000582308 OLFM1Q99784 485 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 CCM2Q9BSQ5 444 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 CCDC68Q9H2F9 335 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 RMI1Q9H9A7 625 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 VIPAS39Q9H9C1 493 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 CYP4F12Q9HCS2 524 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 TM7SF3Q9NS93 570 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 PSMC3IPQ9P2W1 217 aaPredicted RBP9.39□□□□□ -0.91
RFFL-210ENST00000582308 GULP1Q9UBP9 304 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 KLQ9UEF7 1012 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 SLC23A2Q9UGH3 650 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 TBK1Q9UHD2 729 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 LGALS13Q9UHV8 139 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 MOSPD1Q9UJG1 213 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 GNPTGQ9UJJ9 305 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 SLC39A10Q9ULF5 831 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 SUFUQ9UMX1 484 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 GPR34Q9UPC5 381 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 ANKRD6Q9Y2G4 727 aa9.39□□□□□ -0.91
RFFL-210ENST00000582308 COMMD10Q9Y6G5 202 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms