RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 RSC1A1Q92681 617 aa8.58□□□□□ -1.04
CDK5RAP3-224ENST00000582275 CXorf40BQ96DE9 158 aa8.58□□□□□ -1.04
CDK5RAP3-224ENST00000582275 TRAPPC9Q96Q05 1148 aa8.58□□□□□ -1.04
CDK5RAP3-224ENST00000582275 SELENOOQ9BVL4 669 aa8.58□□□□□ -1.04
CDK5RAP3-224ENST00000582275 RIOK2Q9BVS4 552 aaKnown RBP8.58□□□□□ -1.04
CDK5RAP3-224ENST00000582275 TRIM8Q9BZR9 551 aa8.58□□□□□ -1.04
CDK5RAP3-224ENST00000582275 SLC6A16Q9GZN6 736 aa8.58□□□□□ -1.04
CDK5RAP3-224ENST00000582275 SYTL2Q9HCH5 934 aa8.58□□□□□ -1.04
CDK5RAP3-224ENST00000582275 SLC40A1Q9NP59 571 aa8.58□□□□□ -1.04
CDK5RAP3-224ENST00000582275 KLC4Q9NSK0 619 aa8.58□□□□□ -1.04
CDK5RAP3-224ENST00000582275 NTNG1Q9Y2I2 539 aa8.58□□□□□ -1.04
CDK5RAP3-224ENST00000582275 IGHV5-51A0A0C4DH38 117 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 UBA6A0AVT1 1052 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 RGSL1A5PLK6 1076 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 GOLGA6L4A6NEF3 574 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 DFFAO00273 331 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 EEF2KO00418 725 aaKnown RBP8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 DAPK3O43293 454 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 ZBTB11O95625 1053 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 EBLN1P0CF75 366 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 VCLP18206 1134 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 AGXTP21549 392 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 ZNF135P52742 658 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 ZNF143P52747 638 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 STC1P52823 247 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 EPHB1P54762 984 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 GSCP56915 257 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 STX17P56962 302 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 SOX8P57073 446 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 APBA1Q02410 837 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 PTSQ03393 145 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 ADCY2Q08462 1091 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 TRAF2Q12933 501 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 GPR18Q14330 331 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 SSPNQ14714 243 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 KCNAB1Q14722 419 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 PLCL1Q15111 1095 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 INSCQ1MX18 579 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.57□□□□□ -1.046e-6■□□□□ 8.6
CDK5RAP3-224ENST00000582275 MIIPQ5JXC2 388 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 DCAF10Q5QP82 559 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 PLEKHS1Q5SXH7 462 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 AGAP9Q5VTM2 703 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 XKRXQ6PP77 449 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 FAM180AQ6UWF9 173 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 ABRAXAS1Q6UWZ7 409 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 MRGPREQ86SM8 312 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 CREBRFQ8IUR6 639 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 ELOA2Q8IYF1 753 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 JOSD2Q8TAC2 188 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 GRHL3Q8TE85 626 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 TEKT4Q8WW24 435 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 ITLN2Q8WWU7 325 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 INPP5DQ92835 1189 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 CLIP3Q96DZ5 547 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 C14orf79Q96F83 325 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 TIGD1Q96MW7 591 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 MGME1Q9BQP7 344 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 ZNF552Q9H707 407 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 NOD2Q9HC29 1040 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 SIX2Q9NPC8 291 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 ZNF624Q9P2J8 865 aaPredicted RBP8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 MAN1B1Q9UKM7 699 aa8.57□□□□□ -1.04
CDK5RAP3-224ENST00000582275 ANKHD1Q8IWZ3 2542 aaKnown RBP8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 RNF223E7ERA6 249 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 KMOO15229 486 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 KCNN4O15554 427 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 CYP1A1P04798 512 aaPredicted RBP8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 MMEP08473 750 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 SNRPB2P08579 225 aaKnown RBP8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 HBQ1P09105 142 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 PNMA6AP0CW24 399 aaPredicted RBP8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 CTPS1P17812 591 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 TNFAIP3P21580 790 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 IDSP22304 550 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 CA4P22748 312 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 HNRNPH3P31942 346 aaKnown RBP8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 OTX2P32243 289 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 HALP42357 657 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 SLC10A7Q0GE19 358 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 CDC16Q13042 620 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 PKP1Q13835 747 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 NCF4Q15080 339 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 ASIC2Q16515 512 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 DNTTIP2Q5QJE6 756 aaKnown RBP8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 IRAK1BP1Q5VVH5 260 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 RFLNAQ6ZTI6 216 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 MRGPRGQ86SM5 289 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 NOP9Q86U38 636 aaKnown RBP8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 BCORP1Q8N888 145 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 C3orf20Q8ND61 904 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 ANKRD20A12PQ8NF67 263 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 EPS8L1Q8TE68 723 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 CHTF18Q8WVB6 975 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 PIH1D2Q8WWB5 315 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 SNX21Q969T3 373 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 AGAP2Q99490 1192 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 C11orf70Q9BRQ4 267 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 TIMM29Q9BSF4 260 aa8.56□□□□□ -1.04
CDK5RAP3-224ENST00000582275 SLC7A5P2Q9GIP4 190 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms