RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 TRAPPC5Q8IUR0 188 aa12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 BEND7Q8N7W2 519 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 FAM71DQ8N9W8 422 aa12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 WBP1Q96G27 269 aa12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 CCDC74BQ96LY2 380 aa12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ALS2CR12Q96Q35 445 aa12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 TEFMQ96QE5 360 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 TAAR9Q96RI9 348 aa12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 OSGEPL1Q9H4B0 414 aa12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 C10orf88Q9H8K7 445 aa12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ARFGAP3Q9NP61 516 aa12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 PRDM8Q9NQV8 689 aa12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 SLC23A2Q9UGH3 650 aa12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 PACSIN2Q9UNF0 486 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 CAPN6Q9Y6Q1 641 aa12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ZNF106Q9H2Y7 1883 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-222ENST00000581708 MGAQ8IWI9 3026 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 F5H423 210 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 H7C0S8 307 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 UGT1A9O60656 530 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 MTX2O75431 263 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 PRAMEF1O95521 474 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 VIPP01282 170 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 LIPCP11150 499 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 UGT1A6P19224 532 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 MSH3P20585 1137 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 UGT1A1P22309 533 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 UGT1A4P22310 534 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 CSF2RBP32927 897 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 UGT1A3P35503 534 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 RHDQ02161 417 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 CFHR1Q03591 330 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 VAC14Q08AM6 782 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 CLN3Q13286 438 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 NFATC2Q13469 925 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 RPS6KA1Q15418 735 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 KHDC1Q4VXA5 237 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ZNF648Q5T619 568 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 TMEM26Q6ZUK4 368 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ARHGAP22Q7Z5H3 698 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 TRIM48Q8IWZ4 208 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 OR4K2Q8NGD2 314 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ZFPM2Q8WW38 1151 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 LINC00615Q96LM1 132 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 CCNL2Q96S94 520 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ZPBPQ9BS86 351 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 DDA1Q9BW61 102 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 UGT1A7Q9HAW7 530 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 UGT1A10Q9HAW8 530 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 UGT1A8Q9HAW9 530 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ACSL5Q9ULC5 683 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 GUCA1BQ9UMX6 200 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ZKSCAN5Q9Y2L8 839 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 PCDHB11Q9Y5F2 797 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ARL5AQ9Y689 179 aa12.38□□□□□ -0.43
CDK5RAP3-222ENST00000581708 MN1Q10571 1320 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 TRBV23OR9-2A0A075B6M9 112 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 PMS2P1A4D2B8 440 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 PDZK1P1A8MUH7 402 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 CFAP99D6REC4 459 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 K7ENP7 123 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 POP7O75817 140 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 AP2A1O95782 977 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 GSTM1P09488 218 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ANKRD34CP0C6C1 535 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 HGFP14210 728 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ITGALP20701 1170 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 PSMA3P25788 255 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 SLC19A1P41440 591 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ZNF140P52738 457 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 GSTM4Q03013 218 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 OASLQ15646 514 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 BCL7AQ4VC05 210 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 MEI1Q5TIA1 1274 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 NKAIN2Q5VXU1 208 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 KLHL35Q6PF15 583 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 INO80CQ6PI98 192 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 C4orf22Q6V702 233 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 SNX20Q7Z614 316 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 RASGEF1AQ8N9B8 481 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 TRIM58Q8NG06 486 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 USP7Q93009 1102 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 DCUN1D1Q96GG9 259 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 NAF1Q96HR8 494 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 FAM118BQ9BPY3 351 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 RAB33BQ9H082 229 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ASB8Q9H765 288 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 SLC40A1Q9NP59 571 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ZNF624Q9P2J8 865 aaPredicted RBP12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 EPHA6Q9UF33 1036 aa12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 R3HDM2Q9Y2K5 976 aaKnown RBP12.37□□□□□ -0.43
CDK5RAP3-222ENST00000581708 PRAMEF33A0A0G2JMD5 474 aa12.36□□□□□ -0.43
CDK5RAP3-222ENST00000581708 A0A0U1RQJ8 604 aa12.36□□□□□ -0.43
CDK5RAP3-222ENST00000581708 C17orf113A0A1B0GUU1 675 aa12.36□□□□□ -0.43
CDK5RAP3-222ENST00000581708 MGAT4DA6NG13 374 aa12.36□□□□□ -0.43
CDK5RAP3-222ENST00000581708 C9orf172C9J069 976 aa12.36□□□□□ -0.43
CDK5RAP3-222ENST00000581708 STMND1H3BQB6 276 aa12.36□□□□□ -0.43
CDK5RAP3-222ENST00000581708 ERVH48-1M5A8F1 160 aa12.36□□□□□ -0.43
CDK5RAP3-222ENST00000581708 LDB2O43679 373 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms