RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 PPARGP37231 505 aaPredicted RBP15.16■□□□□ 0.02
IFT20-208ENST00000578985 DUSP3P51452 185 aaPredicted RBP15.16■□□□□ 0.02
IFT20-208ENST00000578985 CLCNKAP51800 687 aa15.16■□□□□ 0.02
IFT20-208ENST00000578985 ARL4CP56559 192 aa15.16■□□□□ 0.02
IFT20-208ENST00000578985 AARS2Q5JTZ9 985 aaKnown RBP15.16■□□□□ 0.02
IFT20-208ENST00000578985 KIAA0930Q6ICG6 404 aaPredicted RBP15.16■□□□□ 0.02
IFT20-208ENST00000578985 CERS6Q6ZMG9 384 aa15.16■□□□□ 0.02
IFT20-208ENST00000578985 TMEM135Q86UB9 458 aa15.16■□□□□ 0.02
IFT20-208ENST00000578985 CEP112Q8N8E3 955 aa15.16■□□□□ 0.02
IFT20-208ENST00000578985 ARL10Q8N8L6 244 aa15.16■□□□□ 0.02
IFT20-208ENST00000578985 ZDHHC1Q8WTX9 485 aa15.16■□□□□ 0.02
IFT20-208ENST00000578985 FCRL3Q96P31 734 aaPredicted RBP15.16■□□□□ 0.02
IFT20-208ENST00000578985 EBNA1BP2Q99848 306 aaKnown RBP15.16■□□□□ 0.02
IFT20-208ENST00000578985 LRRC1Q9BTT6 524 aa15.16■□□□□ 0.02
IFT20-208ENST00000578985 MARCH4Q9P2E8 410 aaPredicted RBP15.16■□□□□ 0.02
IFT20-208ENST00000578985 APOBEC2Q9Y235 224 aaKnown RBP15.16■□□□□ 0.02
IFT20-208ENST00000578985 DNMT3AQ9Y6K1 912 aaPredicted RBP15.16■□□□□ 0.02
IFT20-208ENST00000578985 RPS6KL1Q9Y6S9 549 aa15.16■□□□□ 0.02
IFT20-208ENST00000578985 U3KQA8 63 aa15.16■□□□□ 0.02
IFT20-208ENST00000578985 RP1P56715 2156 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 SGTAO43765 313 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 NOBOXO60393 691 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 SNX2O60749 519 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 KCNJ13O60928 360 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 BANF1O75531 89 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 USP1O94782 785 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 FTH1P19P0C7X4 201 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 VCLP18206 1134 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 PGAM1P18669 254 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 ACP1P24666 158 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 ARCN1P48444 511 aaKnown RBP15.15■□□□□ 0.02
IFT20-208ENST00000578985 ACADVLP49748 655 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 SLC7A5Q01650 507 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 SEMA3AQ14563 771 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 HIF1AQ16665 826 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 BCL7AQ4VC05 210 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 CCDC157Q569K6 752 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 C11orf96Q7Z7L8 435 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 SLCO6A1Q86UG4 719 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 AMZ2Q86W34 360 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 SFTPA2Q8IWL1 248 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 OTUD6BQ8N6M0 293 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 BEND7Q8N7W2 519 aaPredicted RBP15.15■□□□□ 0.02
IFT20-208ENST00000578985 PNPLA1Q8N8W4 532 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 NOA1Q8NC60 698 aaKnown RBP15.15■□□□□ 0.02
IFT20-208ENST00000578985 GPR156Q8NFN8 814 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 NAT14Q8WUY8 206 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 NAT9Q9BTE0 207 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 OSGEPL1Q9H4B0 414 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 TOR4AQ9NXH8 423 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 GRHL1Q9NZI5 618 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 PADI4Q9UM07 663 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 DNAJC16Q9Y2G8 782 aa15.15■□□□□ 0.02
IFT20-208ENST00000578985 ZCWPW2A0A1B0GU75 182 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 CPED1A4D0V7 1026 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 GOLGA8KD6RF30 607 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 GOLGA8TH3BQL2 631 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 AP2A2O94973 939 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 POLBP06746 335 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 PBLDP30039 288 aaPredicted RBP15.14■□□□□ 0.01
IFT20-208ENST00000578985 ELK3P41970 407 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 NSG1P42857 185 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 TTPAP49638 278 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 DRG2P55039 364 aaKnown RBP15.14■□□□□ 0.01
IFT20-208ENST00000578985 SMAD1Q15797 465 aaKnown RBP15.14■□□□□ 0.01
IFT20-208ENST00000578985 C14orf28Q4W4Y0 310 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 HP1BP3Q5SSJ5 553 aaPredicted RBP15.14■□□□□ 0.01
IFT20-208ENST00000578985 N4BP2L1Q5TBK1 243 aaPredicted RBP15.14■□□□□ 0.01
IFT20-208ENST00000578985 GUSBP11Q6P575 273 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 PACS1Q6VY07 963 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 EFL1Q7Z2Z2 1120 aaKnown RBP15.14■□□□□ 0.01
IFT20-208ENST00000578985 LDB1Q86U70 411 aaPredicted RBP15.14■□□□□ 0.01
IFT20-208ENST00000578985 IGDCC3Q8IVU1 814 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 LRRC39Q96DD0 335 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 CARD6Q9BX69 1037 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 TBC1D29Q9UFV1 150 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 PCDHGA1Q9Y5H4 931 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 FAM169AQ9Y6X4 670 aa15.14■□□□□ 0.01
IFT20-208ENST00000578985 MGAT4DA6NG13 374 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 ZNF500O60304 480 aaPredicted RBP15.13■□□□□ 0.01
IFT20-208ENST00000578985 OR1I1O60431 355 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 RFPL3O75679 317 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 TTC4O95801 387 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 EML2O95834 649 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 LAMA1P25391 3075 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 PMLP29590 882 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 PRLHRP49683 370 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 PLTPP55058 493 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 MAZP56270 477 aaKnown RBP15.13■□□□□ 0.01
IFT20-208ENST00000578985 CAV1Q03135 178 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 DMPKQ09013 629 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 PDIA2Q13087 525 aaKnown RBP15.13■□□□□ 0.01
IFT20-208ENST00000578985 THOC5Q13769 683 aaKnown RBP15.13■□□□□ 0.01
IFT20-208ENST00000578985 TRADDQ15628 312 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 LONRF1Q17RB8 773 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 GLE1Q53GS7 698 aaKnown RBP15.13■□□□□ 0.01
IFT20-208ENST00000578985 SPANXN3Q5MJ09 141 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 MRNIPQ6NTE8 343 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 NEPROQ6NW34 567 aa15.13■□□□□ 0.01
IFT20-208ENST00000578985 SDCCAG8Q86SQ7 713 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms