RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 NAPGQ99747 312 aaPredicted RBP19.18■□□□□ 0.66
SS18-209ENST00000578595 STRADBQ9C0K7 418 aa19.18■□□□□ 0.66
SS18-209ENST00000578595 NRSN2Q9GZP1 204 aa19.18■□□□□ 0.66
SS18-209ENST00000578595 RDH14Q9HBH5 336 aa19.18■□□□□ 0.66
SS18-209ENST00000578595 CASS4Q9NQ75 786 aa19.18■□□□□ 0.66
SS18-209ENST00000578595 EIF2B3Q9NR50 452 aaKnown RBP19.18■□□□□ 0.66
SS18-209ENST00000578595 ENTPD2Q9Y5L3 495 aa19.18■□□□□ 0.66
SS18-209ENST00000578595 KIR2DS5A0A0G2JLQ3 304 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 A0A0G2JNG1 304 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 OR51F1A6NGY5 319 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 OR5K4A6NMS3 321 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 KIR2DS3K7RE56 304 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 NTN3O00634 580 aaPredicted RBP19.17■□□□□ 0.66
SS18-209ENST00000578595 VIPP01282 170 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 PRSS56P0CW18 603 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 ADRA1DP25100 572 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 PRAMEP78395 509 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 CACNG1Q06432 222 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 KIR2DS5Q14953 304 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 GPR33Q49SQ1 333 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 USP53Q70EK8 1073 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 B3GNT8Q7Z7M8 397 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 PIM3Q86V86 326 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 SERPINA9Q86WD7 417 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 C17orf82Q86X59 251 aaPredicted RBP19.17■□□□□ 0.66
SS18-209ENST00000578595 ACTRT1Q8TDG2 376 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 GRK7Q8WTQ7 553 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 CXorf40BQ96DE9 158 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 CDKN2AIPNLQ96HQ2 116 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 ZNF514Q96K75 400 aaPredicted RBP19.17■□□□□ 0.66
SS18-209ENST00000578595 TMEM74Q96NL1 305 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 BFARQ9NZS9 450 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 PSMD13Q9UNM6 376 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 SATB2Q9UPW6 733 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 TCAF1Q9Y4C2 921 aa19.17■□□□□ 0.66
SS18-209ENST00000578595 CTAGE9A4FU28 777 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 BRINP1O60477 761 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 CPNE6O95741 557 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 GPR3P46089 330 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 FASLGP48023 281 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 CDKN1CP49918 316 aaPredicted RBP19.16■□□□□ 0.66
SS18-209ENST00000578595 ARSDP51689 593 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 SARNPP82979 210 aaKnown RBP19.16■□□□□ 0.66
SS18-209ENST00000578595 B4GALNT1Q00973 533 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 NFE2L1Q14494 772 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 PPP1R7Q15435 360 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 TSTD2Q5T7W7 516 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 NKAIN2Q5VXU1 208 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 ZNF438Q7Z4V0 828 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 KDF1Q8NAX2 398 aaPredicted RBP19.16■□□□□ 0.66
SS18-209ENST00000578595 AVL9Q8NBF6 648 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 OR6P1Q8NGX9 317 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 OR10G6Q8NH81 332 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 SH3KBP1Q96B97 665 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 SARS2Q9NP81 518 aaKnown RBP19.16■□□□□ 0.66
SS18-209ENST00000578595 ZDHHC3Q9NYG2 299 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 CPNE7Q9UBL6 633 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 SLC2A6Q9UGQ3 507 aa19.16■□□□□ 0.66
SS18-209ENST00000578595 CCDC187A0A096LP49 1063 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 CCDC162PA2VCL2 907 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 MROH6A6NGR9 719 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 H7C0S8 307 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 AP3B1O00203 1094 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 CES2O00748 559 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 B4GAT1O43505 415 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 DUX1O43812 170 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 ATP1B2P14415 290 aaPredicted RBP19.15■□□□□ 0.66
SS18-209ENST00000578595 ACRV1P26436 265 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 CLCNKAP51800 687 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 PDX1P52945 283 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 CRADDP78560 199 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 AFTPHQ6ULP2 937 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 NLRP9Q7RTR0 991 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 C11orf96Q7Z7L8 435 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 OTUD6BQ8N6M0 293 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 WDR36Q8NI36 951 aaKnown RBP19.15■□□□□ 0.66
SS18-209ENST00000578595 HEXDCQ8WVB3 486 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 HDAC10Q969S8 669 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 GRAMD1AQ96CP6 724 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 CCDC97Q96F63 343 aaPredicted RBP19.15■□□□□ 0.66
SS18-209ENST00000578595 DCBLD2Q96PD2 775 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 RANBP9Q96S59 729 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 C19orf43Q9BQ61 176 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 NUDT22Q9BRQ3 303 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.15■□□□□ 0.66
SS18-209ENST00000578595 POLR1BQ9H9Y6 1135 aa19.15■□□□□ 0.66
SS18-209ENST00000578595 SCHIP1Q9P0W5 487 aaPredicted RBP19.15■□□□□ 0.66
SS18-209ENST00000578595 BPTFQ12830 3046 aa19.14■□□□□ 0.66
SS18-209ENST00000578595 IGHV1OR21-1A0A087WYE8 117 aa19.14■□□□□ 0.65
SS18-209ENST00000578595 A6NCN8 305 aa19.14■□□□□ 0.65
SS18-209ENST00000578595 OR52A4PA6NMU1 304 aa19.14■□□□□ 0.65
SS18-209ENST00000578595 TMX2-CTNND1H3BSU7 103 aa19.14■□□□□ 0.65
SS18-209ENST00000578595 GOT2P00505 430 aaKnown RBP19.14■□□□□ 0.65
SS18-209ENST00000578595 TPSB2P20231 275 aa19.14■□□□□ 0.65
SS18-209ENST00000578595 MGAT1P26572 445 aa19.14■□□□□ 0.65
SS18-209ENST00000578595 RBMS1P29558 406 aaKnown RBP19.14■□□□□ 0.65
SS18-209ENST00000578595 RTP5Q14D33 572 aa19.14■□□□□ 0.65
SS18-209ENST00000578595 TPSAB1Q15661 275 aa19.14■□□□□ 0.65
SS18-209ENST00000578595 CYP1B1Q16678 543 aa19.14■□□□□ 0.65
SS18-209ENST00000578595 CASC4Q6P4E1 433 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms