RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 HNRNPA2B1P22626 353 aaKnown RBP13.25□□□□□ -0.29
SRSF1-202ENST00000578430 PPP2CBP62714 309 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 PPP2CAP67775 309 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 TIAL1Q01085 375 aaKnown RBP eCLIP13.25□□□□□ -0.29
SRSF1-202ENST00000578430 GTF2H3Q13889 308 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 IRF4Q15306 451 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 TTLL9Q3SXZ7 439 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 CCDC153Q494R4 210 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 BCL7AQ4VC05 210 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 PPM1JQ5JR12 505 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 AGAP9Q5VTM2 703 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 KLC3Q6P597 504 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 SLC36A4Q6YBV0 504 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 FAM174AQ8TBP5 190 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 TCP10LQ8TDR4 215 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 INPP5DQ92835 1189 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 UBXN10Q96LJ8 280 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 GPR21Q99679 349 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 WDR26Q9H7D7 661 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 MID2Q9UJV3 735 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 MED16Q9Y2X0 877 aa13.25□□□□□ -0.29
SRSF1-202ENST00000578430 IGHV1OR15-9A0A0B4J2B8 117 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 KLHL33A6NCF5 533 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 K7ESF4 209 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 FPGTO14772 594 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 AXIN1O15169 862 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 POLR3GO15318 223 aaPredicted RBP13.24□□□□□ -0.29
SRSF1-202ENST00000578430 INPP4BO15327 924 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 NIPSNAP2O75323 286 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 CDK14O94921 469 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 CBSLP0DN79 551 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 ZNF37AP17032 561 aaPredicted RBP13.24□□□□□ -0.29
SRSF1-202ENST00000578430 AKT2P31751 481 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 RPA3P35244 121 aaPredicted RBP13.24□□□□□ -0.29
SRSF1-202ENST00000578430 CBSP35520 551 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 PRLHRP49683 370 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 RGS4P49798 205 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 CLCN7P51798 805 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 IL2P60568 153 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 ATP6V0D1P61421 351 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 CDK3Q00526 305 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 INPP5AQ14642 412 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 LRRC8EQ6NSJ5 796 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 ADGRG6Q86SQ4 1221 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 HEATR4Q86WZ0 1026 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 PELI3Q8N2H9 469 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 CLDN19Q8N6F1 224 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 PLA2G15Q8NCC3 412 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 CADM4Q8NFZ8 388 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 CD200R1Q8TD46 325 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 PDLIM5Q96HC4 596 aaKnown RBP13.24□□□□□ -0.29
SRSF1-202ENST00000578430 SPACA7Q96KW9 195 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 KCNH6Q9H252 994 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 NMRAL1Q9HBL8 299 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 CD93Q9NPY3 652 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 MBNL1Q9NR56 388 aaKnown RBP13.24□□□□□ -0.29
SRSF1-202ENST00000578430 INTS9Q9NV88 658 aaKnown RBP13.24□□□□□ -0.29
SRSF1-202ENST00000578430 GPR34Q9UPC5 381 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 HS3ST3A1Q9Y663 406 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 PRSS21Q9Y6M0 314 aa13.24□□□□□ -0.29
SRSF1-202ENST00000578430 TMEM221A6NGB7 291 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 PRAMEF26H0Y7S4 382 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 M0R296 226 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 SLC31A1O15431 190 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 NDUFS2O75306 463 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 TRIM16O95361 564 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 RBP1P09455 135 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 CCDC166P0CW27 439 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 MYCLP1P12525 358 aaPredicted RBP13.23□□□□□ -0.29
SRSF1-202ENST00000578430 ENO3P13929 434 aaPredicted RBP13.23□□□□□ -0.29
SRSF1-202ENST00000578430 CHN1P15882 459 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 KELP23276 732 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 MAT2AP31153 395 aaKnown RBP13.23□□□□□ -0.29
SRSF1-202ENST00000578430 IGFALSP35858 605 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 ATP1A2P50993 1020 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 YPEL5P62699 121 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 IL9RQ01113 521 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 MPP2Q14168 576 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 ACAP2Q15057 778 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 KHDC1Q4VXA5 237 aaKnown RBP13.23□□□□□ -0.29
SRSF1-202ENST00000578430 USP39Q53GS9 565 aaKnown RBP13.23□□□□□ -0.29
SRSF1-202ENST00000578430 PLEKHS1Q5SXH7 462 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 HHATQ5VTY9 493 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 PAQR3Q6TCH7 311 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 OTOAQ7RTW8 1153 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 PIM3Q86V86 326 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 CENPLQ8N0S6 344 aaPredicted RBP13.23□□□□□ -0.29
SRSF1-202ENST00000578430 ANKRD42Q8N9B4 389 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 RASGEF1AQ8N9B8 481 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 RDH11Q8TC12 318 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 KCTD4Q8WVF5 259 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 KLK6Q92876 244 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 LINC00615Q96LM1 132 aaPredicted RBP13.23□□□□□ -0.29
SRSF1-202ENST00000578430 PHOX2BQ99453 314 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 APOOQ9BUR5 198 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 TPSD1Q9BZJ3 242 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 DERL2Q9GZP9 239 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 RMI1Q9H9A7 625 aa13.23□□□□□ -0.29
SRSF1-202ENST00000578430 SPATA6Q9NWH7 488 aaPredicted RBP13.23□□□□□ -0.29
SRSF1-202ENST00000578430 RUVBL2Q9Y230 463 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms