RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 NAP1L5Q96NT1 182 aaPredicted RBP13.96□□□□□ -0.17
SMARCD2-205ENST00000577686 RNF157Q96PX1 679 aa13.96□□□□□ -0.17
SMARCD2-205ENST00000577686 TRABDQ9H4I3 376 aa13.96□□□□□ -0.17
SMARCD2-205ENST00000577686 SLC40A1Q9NP59 571 aa13.96□□□□□ -0.17
SMARCD2-205ENST00000577686 ARFGAP3Q9NP61 516 aa13.96□□□□□ -0.17
SMARCD2-205ENST00000577686 LHX9Q9NQ69 397 aa13.96□□□□□ -0.17
SMARCD2-205ENST00000577686 OGFRQ9NZT2 677 aa13.96□□□□□ -0.17
SMARCD2-205ENST00000577686 ZNF624Q9P2J8 865 aaPredicted RBP13.96□□□□□ -0.17
SMARCD2-205ENST00000577686 CAPN11Q9UMQ6 739 aa13.96□□□□□ -0.17
SMARCD2-205ENST00000577686 PLAAQ9Y263 795 aa13.96□□□□□ -0.17
SMARCD2-205ENST00000577686 BOD1L1Q8NFC6 3051 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 ZNF28P17035 718 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 KDELR1P24390 212 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 RPL10P27635 214 aaKnown RBP13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 LEPRP48357 1165 aaKnown RBP13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 SH3BP2P78314 561 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 IHHQ14623 411 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 ATP13A4Q4VNC1 1196 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 LDLRAP1Q5SW96 308 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 TMTC4Q5T4D3 741 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 ARMC6Q6NXE6 501 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 SYVN1Q86TM6 617 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 PQLC3Q8N755 202 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 OR8K5Q8NH50 307 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 DEF6Q9H4E7 631 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 HACD3Q9P035 362 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 SCHIP1Q9P0W5 487 aaPredicted RBP13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 SLC30A1Q9Y6M5 507 aa13.95□□□□□ -0.18
SMARCD2-205ENST00000577686 ZFC3H1O60293 1989 aaKnown RBP13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 A0A0A6YYK5 440 aaPredicted RBP13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 UBA6A0AVT1 1052 aaPredicted RBP13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 KLHL33A6NCF5 533 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 TTLL8A6PVC2 850 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 GOLGA6L19H0YKK7 550 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 MTSS1O43312 755 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 CPNE3O75131 537 aaKnown RBP13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 FECHP22830 423 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 F8A1P23610 371 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 VARSP26640 1264 aaKnown RBP13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 PGDP52209 483 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 UBASH3AP57075 661 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 ZBTB17Q13105 803 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 ITGA9Q13797 1035 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 DNTTIP2Q5QJE6 756 aaKnown RBP13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 ZNF648Q5T619 568 aaPredicted RBP13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 FHL5Q5TD97 284 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 AMZ2Q86W34 360 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 CARFQ8N187 725 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 BEND7Q8N7W2 519 aaPredicted RBP13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 GALNT11Q8NCW6 608 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 DTX3LQ8TDB6 740 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 CT55Q8WUE5 264 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 CPLX3Q8WVH0 158 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 RSC1A1Q92681 617 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 ZNF514Q96K75 400 aaPredicted RBP13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 AGAP3Q96P47 875 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 TRIB3Q96RU7 358 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 ACTL8Q9H568 366 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 FANCEQ9HB96 536 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 ACSS2Q9NR19 701 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 SLC23A2Q9UGH3 650 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 TLK1Q9UKI8 766 aa13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 DNMT3AQ9Y6K1 912 aaPredicted RBP13.94□□□□□ -0.18
SMARCD2-205ENST00000577686 TLCD2A6NGC4 264 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 OR52A4PA6NMU1 304 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 MAP3K7O43318 606 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 MTX2O75431 263 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 AGFG2O95081 481 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 KLK3P07288 261 aaPredicted RBP13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 PIRTP0C851 137 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 PYGMP11217 842 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 BPIP17213 487 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 HMGCLP35914 325 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 SPAM1P38567 509 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 DRG2P55039 364 aaKnown RBP13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 TAS2R40P59535 323 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 FANCCQ00597 558 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 DMPKQ09013 629 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 TMEM115Q12893 351 aaPredicted RBP13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 SLC10A2Q12908 348 aaPredicted RBP13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 XRCC4Q13426 336 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 SEMA5AQ13591 1074 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 PPP2R5EQ16537 467 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 UGT8Q16880 541 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 OOSP2Q86WS3 158 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 HPS6Q86YV9 775 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 RFX6Q8HWS3 928 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 CNTD1Q8N815 330 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 SLC41A2Q96JW4 573 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 GLOD4Q9HC38 313 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 ZNHIT6Q9NWK9 470 aaKnown RBP13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 TRIM10Q9UDY6 481 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 PKP3Q9Y446 797 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 PCDHGB7Q9Y5F8 929 aa13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.93□□□□□ -0.18
SMARCD2-205ENST00000577686 BLACEA4D250 179 aa13.92□□□□□ -0.18
SMARCD2-205ENST00000577686 KIF1CO43896 1103 aaKnown RBP13.92□□□□□ -0.18
SMARCD2-205ENST00000577686 KRT1P04264 644 aa13.92□□□□□ -0.18
SMARCD2-205ENST00000577686 TPM1P09493 284 aa13.92□□□□□ -0.18
SMARCD2-205ENST00000577686 TMEM253P0C7T8 217 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms