RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 YIPF1Q9Y548 306 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 PCDHGB1Q9Y5G3 927 aa2.48□□□□□ -2.01
COPS3-213ENST00000577210 CGNL1Q0VF96 1302 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 ZNF541Q9H0D2 1346 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 TMEM8BA6NDV4 472 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 H3BQ06 376 aaPredicted RBP2.47□□□□□ -2.01
COPS3-213ENST00000577210 MID1O15344 667 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 ZNHIT1O43257 154 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 LDLRP01130 860 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 APOA4P06727 396 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 FAM106CPP0CH98 169 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 ZNF12P17014 697 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 HOXB6P17509 224 aaKnown RBP2.47□□□□□ -2.01
COPS3-213ENST00000577210 ITGB6P18564 788 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 LIG4P49917 911 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 NANOS2P60321 138 aaKnown RBP2.47□□□□□ -2.01
COPS3-213ENST00000577210 SNRPEP62304 92 aaKnown RBP2.47□□□□□ -2.01
COPS3-213ENST00000577210 PSMC6P62333 389 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 CXCL9Q07325 125 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 SLC20A2Q08357 652 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 CDC16Q13042 620 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 TRAF3Q13114 568 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 GTF2H2Q13888 395 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 BECN1Q14457 450 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 IRF3Q14653 427 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 LRIF1Q5T3J3 769 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 C1QTNF12Q5T7M4 302 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 LCE1AQ5T7P2 110 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 KIAA0930Q6ICG6 404 aaPredicted RBP2.47□□□□□ -2.01
COPS3-213ENST00000577210 NAA16Q6N069 864 aaPredicted RBP2.47□□□□□ -2.01
COPS3-213ENST00000577210 GTF2H2CQ6P1K8 395 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 FAM47EQ6ZV65 393 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 INTS8Q75QN2 995 aaKnown RBP2.47□□□□□ -2.01
COPS3-213ENST00000577210 BHLHA9Q7RTU4 235 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 C16orf82Q7Z2V1 217 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 ANKRD23Q86SG2 305 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 FOXRED2Q8IWF2 684 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 DCP1BQ8IZD4 617 aaKnown RBP2.47□□□□□ -2.01
COPS3-213ENST00000577210 MINDY1Q8N5J2 469 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 C9orf106Q8NAJ2 232 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 HJURPQ8NCD3 748 aaPredicted RBP2.47□□□□□ -2.01
COPS3-213ENST00000577210 CCDC191Q8NCU4 936 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 SECTM1Q8WVN6 248 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 ABTB1Q969K4 478 aaPredicted RBP2.47□□□□□ -2.01
COPS3-213ENST00000577210 MTERF3Q96E29 417 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 SCRN2Q96FV2 425 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 GRAMD2BQ96HH9 432 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 RADILQ96JH8 1075 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 ZMAT2Q96NC0 199 aaKnown RBP2.47□□□□□ -2.01
COPS3-213ENST00000577210 IL17FQ96PD4 163 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 C1QTNF4Q9BXJ3 329 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 SPATC1LQ9H0A9 340 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 LRMDAQ9H2I8 198 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 KCNN2Q9H2S1 579 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 KCNK15Q9H427 330 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 DNAJC18Q9H819 358 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 DDX31Q9H8H2 851 aaKnown RBP2.47□□□□□ -2.01
COPS3-213ENST00000577210 NOX4Q9NPH5 578 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 MALT1Q9UDY8 824 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 DDX25Q9UHL0 483 aaKnown RBP2.47□□□□□ -2.01
COPS3-213ENST00000577210 NOL7Q9UMY1 257 aaKnown RBP2.47□□□□□ -2.01
COPS3-213ENST00000577210 ZNF148Q9UQR1 794 aa2.47□□□□□ -2.01
COPS3-213ENST00000577210 A0A1W2PRQ8 180 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 TCRBV21S2A2A0A5A6 115 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 MED19A0JLT2 244 aaPredicted RBP2.46□□□□□ -2.02
COPS3-213ENST00000577210 LNP1A1A4G5 178 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 OR2A25A4D2G3 310 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 ASPDHA6ND91 283 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 C4orf47A7E2U8 309 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 A8MV72 311 aaPredicted RBP2.46□□□□□ -2.02
COPS3-213ENST00000577210 IFNL4K9M1U5 179 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 ERAL1O75616 437 aaKnown RBP2.46□□□□□ -2.02
COPS3-213ENST00000577210 RSL1D1O76021 490 aaKnown RBP2.46□□□□□ -2.02
COPS3-213ENST00000577210 CAVIN2O95810 425 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 ABCB1P08183 1280 aaPredicted RBP2.46□□□□□ -2.02
COPS3-213ENST00000577210 CETPP11597 493 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 GLULP15104 373 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 EEF1DP29692 281 aaKnown RBP2.46□□□□□ -2.02
COPS3-213ENST00000577210 HOXA11P31270 313 aaPredicted RBP2.46□□□□□ -2.02
COPS3-213ENST00000577210 COPB2P35606 906 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 AHRP35869 848 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 NR2C2P49116 596 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 ZNF75DP51815 510 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 PCLAFQ15004 111 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 KRTCAP3Q53RY4 240 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 FAM133BQ5BKY9 247 aaKnown RBP2.46□□□□□ -2.02
COPS3-213ENST00000577210 BMP2KLQ5H9B9 411 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 GARNL3Q5VVW2 1013 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 C9orf57Q5W0N0 161 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 NSUN5P2Q63ZY6 315 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 KRT80Q6KB66 452 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 PACS1Q6VY07 963 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 HAUS6Q7Z4H7 955 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 NRROSQ86YC3 692 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 GPALPP1Q8IXQ4 340 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 C1orf87Q8N0U7 546 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 GUF1Q8N442 669 aaKnown RBP2.46□□□□□ -2.02
COPS3-213ENST00000577210 RFLNBQ8N5W9 214 aa2.46□□□□□ -2.02
COPS3-213ENST00000577210 C1orf52Q8N6N3 182 aaKnown RBP2.46□□□□□ -2.02
COPS3-213ENST00000577210 IL17RCQ8NAC3 791 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms