RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SEPHS1P49903 392 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 INHBCP55103 352 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 MAZP56270 477 aaKnown RBP6.21□□□□□ -1.42
NUP88-212ENST00000576708 OR1D5P58170 312 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 KIAA1024LP59773 190 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 NSUN2Q08J23 767 aaKnown RBP eCLIP6.21□□□□□ -1.42
NUP88-212ENST00000576708 KLHL30Q0D2K2 578 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 GRM3Q14832 879 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 CNGA3Q16281 694 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 KIF26BQ2KJY2 2108 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 YOD1Q5VVQ6 348 aaPredicted RBP6.21□□□□□ -1.42
NUP88-212ENST00000576708 PNCKQ6P2M8 343 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 LVRNQ6Q4G3 990 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 CEP128Q6ZU80 1094 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 CBLL1Q75N03 491 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 RAB11FIP2Q7L804 512 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 POLNQ7Z5Q5 900 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 CLEC14AQ86T13 490 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 ZNF605Q86T29 641 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 TSPAN33Q86UF1 283 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 ZFAND4Q86XD8 727 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 NRROSQ86YC3 692 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 ARL14Q8N4G2 192 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.21□□□□□ -1.42
NUP88-212ENST00000576708 LSM14AQ8ND56 463 aaKnown RBP6.21□□□□□ -1.42
NUP88-212ENST00000576708 PATE1Q8WXA2 126 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 COQ10AQ96MF6 247 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 PSKH2Q96QS6 385 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 SPATA9Q9BWV2 254 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 DPH1Q9BZG8 443 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 DPEP2Q9H4A9 486 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 RDH14Q9HBH5 336 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 NOD2Q9HC29 1040 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 SPATS2LQ9NUQ6 558 aaKnown RBP6.21□□□□□ -1.42
NUP88-212ENST00000576708 AIPL1Q9NZN9 384 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 LRIT1Q9P2V4 623 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 PISDQ9UG56 409 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 CD84Q9UIB8 345 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 MYO6Q9UM54 1294 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 LOXL2Q9Y4K0 774 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 DGKBQ9Y6T7 804 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 RP1P56715 2156 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 PTPRQQ9UMZ3 2332 aa6.21□□□□□ -1.42
NUP88-212ENST00000576708 GCN1Q92616 2671 aaKnown RBP6.21□□□□□ -1.42
NUP88-212ENST00000576708 TRBV23OR9-2A0A075B6M9 112 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 PRAMEF33A0A0G2JMD5 474 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 PRSS38A1L453 326 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 CFAP69A5D8W1 941 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 GOLGA6CA6NDK9 693 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 GOLGA6BA6NDN3 693 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 NPIPB15A6NHN6 443 aaPredicted RBP6.2□□□□□ -1.42
NUP88-212ENST00000576708 K7ENP7 123 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 HTRA2O43464 458 aaPredicted RBP6.2□□□□□ -1.42
NUP88-212ENST00000576708 MAFKO60675 156 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 PRAMEF10O60809 474 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 HEXIM1O94992 359 aaKnown RBP6.2□□□□□ -1.42
NUP88-212ENST00000576708 FGF1P05230 155 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 ITGA2BP08514 1039 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 PDHA1P08559 390 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 SNRPB2P08579 225 aaKnown RBP6.2□□□□□ -1.42
NUP88-212ENST00000576708 CD48P09326 243 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 GOLGA6DP0CG33 693 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 GZMAP12544 262 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 WT1P19544 449 aaPredicted RBP6.2□□□□□ -1.42
NUP88-212ENST00000576708 VIPR1P32241 457 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 TRIM23P36406 574 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 PRKCIP41743 596 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 GNPDA1P46926 289 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 HCAR3P49019 387 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 MAPK10P53779 464 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 UCNP55089 124 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 AP1S1P61966 158 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 B4GALNT1Q00973 533 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 RHDQ02161 417 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 HLTFQ14527 1009 aaKnown RBP eCLIP6.2□□□□□ -1.42
NUP88-212ENST00000576708 ZNF235Q14590 738 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 IHHQ14623 411 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 RFTN1Q14699 578 aaPredicted RBP6.2□□□□□ -1.42
NUP88-212ENST00000576708 KIR3DS1Q14943 382 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 NR1I3Q14994 352 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 C16orf72Q14CZ0 275 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 AMZ1Q400G9 498 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 ATP13A4Q4VNC1 1196 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 C14orf28Q4W4Y0 310 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 CERCAMQ5T4B2 595 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 PHF19Q5T6S3 580 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 SPECC1LQ69YQ0 1117 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 INO80CQ6PI98 192 aaPredicted RBP6.2□□□□□ -1.42
NUP88-212ENST00000576708 DOK6Q6PKX4 331 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 SLC30A9Q6PML9 568 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 TMCO3Q6UWJ1 677 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 Q6ZVL8 140 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 USP53Q70EK8 1073 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 SPRED1Q7Z699 444 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 TRIM74Q86UV6 250 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 VASH2Q86V25 355 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 HEATR4Q86WZ0 1026 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 CBARPQ8N350 705 aaPredicted RBP6.2□□□□□ -1.42
NUP88-212ENST00000576708 ATL2Q8NHH9 583 aa6.2□□□□□ -1.42
NUP88-212ENST00000576708 WDR48Q8TAF3 677 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms