RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	OR2AG2	A6NM03	316 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	PDZK1P1	A8MUH7	402 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	CCL22	O00626	93 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	B4GAT1	O43505	415 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	PHF2	O75151	1096 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	POP7	O75817	140 aa	Known RBP	24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	COIL	P38432	576 aa	Predicted RBP	24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	LSS	P48449	732 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	FNTA	P49354	379 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	INHBC	P55103	352 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	OR1D5	P58170	312 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	GNG11	P61952	73 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	EIF3I	Q13347	325 aa	Known RBP	24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	MAP9	Q49MG5	647 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	ZRANB3	Q5FWF4	1079 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	TTC27	Q6P3X3	843 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	CCDC137	Q6PK04	289 aa	Known RBP	24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	ABRAXAS1	Q6UWZ7	409 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	PPHLN1	Q8NEY8	458 aa	Known RBP	24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	GRK7	Q8WTQ7	553 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	ATXN7L3B	Q96GX2	97 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	SLC38A3	Q99624	504 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	ZDHHC3	Q9NYG2	299 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	KCNK4	Q9NYG8	393 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	CPNE7	Q9UBL6	633 aa		24.89	■■□□□ 1.58
SRRM2-223	ENST00000575701	MAP1B	P46821	2468 aa	Known RBP	24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	IGLV3-16	A0A075B6K0	115 aa		24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	TRBV23OR9-2	A0A075B6M9	112 aa		24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	CCDC187	A0A096LP49	1063 aa		24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	CASC3	O15234	703 aa	Known RBP	24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	KRT14	P02533	472 aa		24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	XRCC1	P18887	633 aa	Predicted RBP	24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	ACRV1	P26436	265 aa		24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	SQSTM1	Q13501	440 aa		24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	CCDC38	Q502W7	563 aa		24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	FNBP1L	Q5T0N5	605 aa		24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	TSTD2	Q5T7W7	516 aa		24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	PIM3	Q86V86	326 aa		24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	WDR36	Q8NI36	951 aa	Known RBP	24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	LINC00615	Q96LM1	132 aa	Predicted RBP	24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	TCAF1	Q9Y4C2	921 aa		24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	ASPM	Q8IZT6	3477 aa		24.88	■■□□□ 1.57
SRRM2-223	ENST00000575701	BPTF	Q12830	3046 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	IGHV1OR21-1	A0A087WYE8	117 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	DXO	O77932	396 aa	Known RBP	24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	ATP1B2	P14415	290 aa	Predicted RBP	24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	HAL	P42357	657 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	MAGEA6	P43360	314 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	EPHA4	P54764	986 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	UBE2I	P63279	158 aa	Known RBP	24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	GABRE	P78334	506 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	SARNP	P82979	210 aa	Known RBP	24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	ACVR1	Q04771	509 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	AMZ1	Q400G9	498 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	IGF2-AS	Q6U949	168 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	DET1	Q7L5Y6	550 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	SERPINA9	Q86WD7	417 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	OR13J1	Q8NGT2	312 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	OR10G6	Q8NH81	332 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	24.87	■■□□□ 1.57	2e-8	■■■■■ 74.5
SRRM2-223	ENST00000575701	TMEM159	Q96B96	161 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	SGF29	Q96ES7	293 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	NAPG	Q99747	312 aa	Predicted RBP	24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	IL22	Q9GZX6	179 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	EPB41L1	Q9H4G0	881 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	FAM96A	Q9H5X1	160 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	UCK1	Q9HA47	277 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	POT1	Q9NUX5	634 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	PCDHGA8	Q9Y5G5	932 aa		24.87	■■□□□ 1.57
SRRM2-223	ENST00000575701	MGAT4D	A6NG13	374 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	CD1C	P29017	333 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	MLLT3	P42568	568 aa	Predicted RBP	24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	NPY2R	P49146	381 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	PRLHR	P49683	370 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	ZFP36L1	Q07352	338 aa	Known RBP	24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	GPS1	Q13098	491 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	SEPT7	Q16181	437 aa	Known RBP	24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	C3orf38	Q5JPI3	329 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	PCID2	Q5JVF3	399 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	ARMC3	Q5W041	872 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	PAPD7	Q5XG87	772 aa	Known RBP	24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	AFTPH	Q6ULP2	937 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	TAS2R42	Q7RTR8	314 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	B3GNT8	Q7Z7M8	397 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	SLITRK4	Q8IW52	837 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	TRIM48	Q8IWZ4	208 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	RBM12B	Q8IXT5	1001 aa	Known RBP	24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	OR2L2	Q8NH16	312 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	AHCYL2	Q96HN2	611 aa	Known RBP	24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	VPS37B	Q9H9H4	285 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	EPB41L5	Q9HCM4	733 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	SMARCAL1	Q9NZC9	954 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	BFAR	Q9NZS9	450 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	SATB2	Q9UPW6	733 aa		24.86	■■□□□ 1.57
SRRM2-223	ENST00000575701	IGF2R	P11717	2491 aa		24.85	■■□□□ 1.57
SRRM2-223	ENST00000575701	CCDC78	A2IDD5	438 aa		24.85	■■□□□ 1.57
SRRM2-223	ENST00000575701	LILRA5	A6NI73	299 aa		24.85	■■□□□ 1.57
SRRM2-223	ENST00000575701	ZNF185	O15231	689 aa		24.85	■■□□□ 1.57
SRRM2-223	ENST00000575701	DUX1	O43812	170 aa		24.85	■■□□□ 1.57

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms